Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq13 246 3e-60
seq10 158 1e-33
>seq13
Length=360411
Score = 246 bits (272), Expect = 3e-60
Identities = 1116/1749 (64%), Gaps = 35/1749 (2%)
Strand=Plus/Minus
Query 36826 GTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTG 36885
||||||| || ||||| || || || | ||| ||||||||||||| |||||
Sbjct 46585 GTTCTCAAGTAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAA 46526
Query 36886 GTCAGTTTTGCGTATGTAGGATTATCT-ATATATATTGTCATTGATTGACTTTGATCTAT 36944
|||| || | ||||| || ||| || | || ||| || || ||||| ||
Sbjct 46525 GTCAACTTACCCATAGTAGG-TTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAAT 46467
Query 36945 AAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGT 37004
||||||| |||||||||| ||||| || | ||| || ||||| || ||||| || ||
Sbjct 46466 AAACGCAGCTCTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGT 46407
Query 37005 TTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATAGAACCATTATG 37061
|||||||| | || || | ||||| | || | ||| ||||| || || || |
Sbjct 46406 TTTATATAAACGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTT 46347
Query 37062 TAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTA--TTAGTTCTCTC 37119
| || | ||||| || | | |||||| ||| | | | | | ||| || ||
Sbjct 46346 GGCAATGATGTTGTTCTTCATATTGTCATTCCAAATACCTA-AGTCAACTAAGTCCT-TC 46289
Query 37120 AATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTG 37179
|| | |||||| || |||| ||| || || || | | |||||||| | || || |||
Sbjct 46288 AACATGTGTGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTG 46229
Query 37180 CTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGC 37239
|| || ||||||| | | || || |||| || |||||||| ||||| || || |||
Sbjct 46228 GATGTGTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGC 46169
Query 37240 ATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATT--AATTCTCTTTTTTAGTT 37297
|| || || | || | |||||| | || ||| | |||| | || |||
Sbjct 46168 ATCGGAGCAACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGT- 46110
Query 37298 CATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAG-AATACCT 37356
|| ||| ||||| || || | ||| || | ||||| || || || | ||| |||
Sbjct 46109 -ATCCCAGTCCCACAACTCGGATGGCTTTCTGTCCCACAAGTCGTACTGCAACAATCCCT 46051
Query 37357 TTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAA 37416
|| ||| |||||| | | |||||||||||| || || | | ||| || ||| |
Sbjct 46050 TTGA-CGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATA 45992
Query 37417 CTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCT 37476
| ||| | || |||| ||| || || ||||| || || || || || ||| |||
Sbjct 45991 GATGCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCT 45932
Query 37477 TCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCG 37536
|| | | ||||| | | | ||| | || || ||||||| | ||| ||||| ||
Sbjct 45931 TCCTGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCA 45872
Query 37537 ATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTG 37596
| | | || ||||| | | || |||| ||||| | ||| || || ||| ||||
Sbjct 45871 AGAGCAATAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTT 45812
Query 37597 ATATCTATTATTTTATTTAGATTT---TTAAC-----TAGTATTTTCGTAATTATTCTC- 37647
| || || ||| | || | ||| |||| | || |||| || ||
Sbjct 45811 CTGTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCA 45752
Query 37648 AACTTGT----CGAACATAAATACGTTATTATTAACAAATTTACTCAACGAAATAGATCC 37703
|| |||| |||| || || | | || | ||| ||| | ||| | ||| || |
Sbjct 45751 AAGTTGTACCAGGAAC-TAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGC 45693
Query 37704 TAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATT 37763
| ||||| ||||||||||| ||| | | | | | |||||| ||| | ||
Sbjct 45692 CAAGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTT 45633
Query 37764 ACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATA 37823
| ||| | || | ||||| || |||| || | ||| || ||||||| ||| || ||
Sbjct 45632 AGATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTA 45573
Query 37824 TAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCT 37883
| || | || |||||| || |||| || || | ||||| | ||| || ||| |
Sbjct 45572 CAACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCA-AAGCTTTT 45514
Query 37884 -TGCTTTAACGATCG--CTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTT 37940
|| || ||| | | ||| | ||| | | || || | | || || |
Sbjct 45513 GAGCCTTGACGGTGGATCTTCCACGGCCTTC--TCTCTCATACTTTTCGTACAAAGCTTC 45456
Query 37941 AAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCA 38000
||| |||| || | ||||| || || ||| ||| |||| | | | || |||
Sbjct 45455 AAACTCATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCA 45396
Query 38001 TTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAA 38060
|| | | || ||| || | | ||| || ||||| || | ||| | |||| || ||
Sbjct 45395 GTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAA 45336
Query 38061 ATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATAT 38120
|||| ||| |||| |||||| || || |||||||| | | | || ||||| ||
Sbjct 45335 ATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAAT 45276
Query 38121 ATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTG 38180
||||| ||||| || || | ||||||| | || ||||| || || | || || ||
Sbjct 45275 GTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTG 45216
Query 38181 ATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTT 38240
| | ||| | ||||||| || | | | | ||| || | ||||| ||||| |
Sbjct 45215 GTCGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGT 45156
Query 38241 GCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTAT 38300
||||| |||| | || |||| || || || || || || ||| || ||
Sbjct 45155 ACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAAT 45096
Query 38301 TCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTAT 38360
||||| ||| || || |||||||||||| ||||| || || | ||||| || ||
Sbjct 45095 ACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGAT 45036
Query 38361 ACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGC 38420
||||||||| || | | | |||||| |||||||| || ||| || || ||
Sbjct 45035 GGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGC 44976
Query 38421 GTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTC 38480
|| || || || ||||| | || | || || | | |||| |||| || |||||
Sbjct 44975 ATTGAACAAGGTTGGAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTC 44916
Query 38481 TATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTG 38540
|| ||| || || ||| ||||||||||| | | || ||||| | || ||| ||
Sbjct 44915 GATCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTG 44856
Query 38541 TGGTCTTTC 38549
|||||||||
Sbjct 44855 TGGTCTTTC 44847
>seq10
Length=432243
Score = 158 bits (174), Expect = 1e-33
Identities = 390/588 (66%), Gaps = 8/588 (1%)
Strand=Plus/Plus
Query 11621 AACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAA 11680
|||| || || ||||| ||| || |||||||||||||| | || | ||| || ||
Sbjct 412624 AACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTGGAG 412683
Query 11681 AATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCA 11740
|| || | || |||||||| |||| || || | ||| || |||| ||||| || |||
Sbjct 412684 AACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCA 412743
Query 11741 GAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTG 11797
|| ||||| || || || ||||| ||||| || || | |||||| || | | ||| |
Sbjct 412744 GAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCCTCG 412803
Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857
| | | |||||| | |||||| || || ||||| || | ||| || ||||
Sbjct 412804 TCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCG 412863
Query 11858 ATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAA 11917
|||||||| || ||| ||| || ||| | | || | || || || |||
Sbjct 412864 ATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGATCAACAAA 412923
Query 11918 CTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCC 11977
|| |||| || || || |||||||| || || ||||| ||||||||| |||
Sbjct 412924 GAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTTGGCC 412983
Query 11978 TCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCA 12037
|||| ||| || || || |||| | ||| | || |||||||| ||||| || ||
Sbjct 412984 TCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCC 413043
Query 12038 CTAGATGCAAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT-- 12094
|| ||||| || || | | | || || ||| || | |||| | ||| | |
Sbjct 413044 GAAGCAGCAAAGAAAGCCAACACTCTG-GAGATGAAGAATCTCTCGTTGTCAGTCATTCT 413102
Query 12095 -TTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGC 12153
|| | ||| || | | ||||| || || || | |||||| | ||||| ||| |||
Sbjct 413103 GTTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAGATGC 413162
Query 12154 CACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAA 12201
| | | ||| ||||||| ||| || || | ||||| ||||||||
Sbjct 413163 TTCGGCCTTTTTGTACATTTGCCAAATCTCGTTGTACTTGATAGGGAA 413210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524489602320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |