Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq13 286 5e-72 seq10 251 9e-62 seq28 111 2e-19 >seq13 Length=360411 Score = 286 bits (316), Expect = 5e-72 Identities = 1153/1810 (64%), Gaps = 31/1810 (2%) Strand=Plus/Minus Query 64878 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 64937 |||||||| ||||| || | || ||||||||||||| ||||| || | || Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 64938 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 64997 | | || ||| || ||||| |||| || || ||||| || || || | Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCT 46457 Query 64998 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACT 65057 ||||| |||||||| | ||||| ||| || | |||||||| | |||||||| | Sbjct 46456 CTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAA 46397 Query 65058 CGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATC 65114 ||||| || || ||||| | |||| | |||||||||||| | || || || Sbjct 46396 CGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATG 46337 Query 65115 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATG 65170 | ||||| || | |||||||| | | || || || || || | | | || Sbjct 46336 TTGTTCTTCATATTGTCATTCCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTG 46281 Query 65171 CGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATA 65230 || ||||| | || || || || | | ||||| | | |||||| || || || Sbjct 46280 TGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTA 46221 Query 65231 CGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 65290 ||||| | | || || || ||||| ||||||| ||| || || || ||||| || || Sbjct 46220 AGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGC 46161 Query 65291 CACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATT 65350 || | ||| |||||| ||||||| | | | || | || | || ||||| | Sbjct 46160 AACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATCCCAGTC 46101 Query 65351 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG-AATACCGTTACTGGCGT 65409 ||| | || || || || | ||| || || | | Sbjct 46100 CCACAACTCGGATGGCTTTCTGTCCCACAAGTCGTACTGCAACAATCCCTTTGACGCAGG 46041 Query 65410 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 65469 | || ||| ||||||| || ||||| ||||||| || ||| || || | || || | Sbjct 46040 A-GAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGATGCTTCCA 45982 Query 65470 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTAT 65529 ||| | | ||||||||| ||||| |||| | || | |||| |||||| || | Sbjct 45981 CAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCCTGGGAGT 45922 Query 65530 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 65589 | || || | | ||| || || || || || | |||||||| |||| | | |||| Sbjct 45921 CGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAG 45862 Query 65590 GTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 65649 |||| | |||| |||| || || ||||| || ||| ||| |||| | || || | Sbjct 45861 GTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGA 45802 Query 65650 TTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC----- 65704 || | || | ||||| || || ||| ||| || | || || ||| | Sbjct 45801 TTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTACC 45742 Query 65705 ---AAATCGCT-CATCTATTACAAACA-TGTT--CAATGCAACAGATGCCAGATTACAAA 65757 || | | | ||||| | ||| | || ||| |||| || |||| ||||| | Sbjct 45741 AGGAACTAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGA 45682 Query 65758 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 65817 | || || || | | | || | | |||||| || | ||| | |||| Sbjct 45681 CAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGATGATTTGA 45622 Query 65818 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 65877 | | || || || | ||| ||| | || |||||||| |||||||| || | ||||||| Sbjct 45621 TAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATG 45562 Query 65878 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 65937 |||| || || ||| | || | ||| | || | | ||| | | ||||||| | Sbjct 45561 GAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGACGG 45502 Query 65938 TAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCC 65997 | ||| | | |||||| || || | ||||| ||| ||||| || || Sbjct 45501 TGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGT 45442 Query 65998 AAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 66057 | |||| |||| |||||| ||||| ||| | | ||| | ||| || |||| | | Sbjct 45441 AGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTT 45382 Query 66058 TCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTAT 66117 |||| ||||| || | ||| || ||||||||||| || |||||||||| |||| Sbjct 45381 CAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAA 45322 Query 66118 GTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACG 66177 ||| || || || |||||| ||| |||| ||| | | ||| ||| |||||| | Sbjct 45321 TTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAG 45262 Query 66178 GTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 66237 | |||||||| || || | | | || |||| ||||| || || || || | || | | Sbjct 45261 GCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTG 45202 Query 66238 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGG 66297 | ||||| || |||| | || ||||||||| ||||| || || ||||| || || || | Sbjct 45201 CTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTG 45142 Query 66298 AGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTT 66357 || || ||| | | || || || | ||| || || || || | | Sbjct 45141 CAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCT 45082 Query 66358 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 66417 | || ||||| |||||| ||||| || || || || || || || |||||| ||| Sbjct 45081 TGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCA 45022 Query 66418 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 66477 || || || ||||| ||||||||| | | || || ||||| || ||||| | Sbjct 45021 TGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTG 44962 Query 66478 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 66537 ||||| |||| ||||| || | | || | | |||||| || || || | || | Sbjct 44961 GAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAA 44902 Query 66538 TATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 66595 | | |||| ||||| || || || || | ||| | || ||||| ||||||||| | Sbjct 44901 TGT--CATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTTCAGC 44844 Query 66596 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 66655 | ||| ||| | | | | |||||| ||| |||||||||| || ||||| || ||||| Sbjct 44843 AACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 44784 Query 66656 GTA--TGAAA 66663 ||| ||||| Sbjct 44783 GTAGTTGAAA 44774 >seq10 Length=432243 Score = 251 bits (278), Expect = 9e-62 Identities = 559/833 (67%), Gaps = 12/833 (1%) Strand=Plus/Plus Query 35888 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 35947 || |||||||| || || || ||| | || || || || ||||| || |||||||| ||| Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422 Query 35948 ATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 36007 | ||||| |||| || || ||||| | || ||||||||| || || || || Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTCG 412482 Query 36008 ATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAACTGGAAGAGCCACAGT 36066 | ||| ||||| ||||| |||||||| | ||| || |||| | || | || Sbjct 412483 ACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTG-CTGGCAAGGCATCGGT 412541 Query 36067 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACT 36126 || |||||| |||||||| ||| || || || ||||| || | || | Sbjct 412542 AAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCTTCTCCACGATAGCTGGGTT 412601 Query 36127 CGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTC 36186 ||| | || || |||| ||| || || || || ||| | ||| ||||| Sbjct 412602 TGGTCTGTTGTTCAAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGTC 412661 Query 36187 TCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA 36246 ||| | ||| ||||||||||| ||||| || || ||||| | || | ||| || | ||| Sbjct 412662 TCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACCA 412721 Query 36247 AAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 36306 || || || ||||| || ||||| |||||||| ||||| || || |||||||| | | Sbjct 412722 GAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCAA 412781 Query 36307 TCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 ||| || || | ||| ||| | | ||||| | ||||| ||||||||||| Sbjct 412782 TCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCTT 412841 Query 36364 TTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTT 36423 || | ||||| || | || ||||| || || | | ||| || ||| ||||| Sbjct 412842 CTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTTT 412901 Query 36424 AACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTG 36483 | || | || ||||| | | || ||||||| || |||||||| || || || Sbjct 412902 GATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCTG 412961 Query 36484 AAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT--GCT 36541 ||||||||||||||| | ||||| | ||||| || || | | |||| ||||| | Sbjct 412962 GAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAA--GTTCTCCACC 413019 Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 || || ||||| || |||||||| || ||||| || ||||| || || || Sbjct 413020 AAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAAG 413079 Query 36602 TATTTTTCGTTTGGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACT 36658 || | ||||| || | | || ||||| || ||||| ||||| || | || | | Sbjct 413080 AATCTCTCGTTGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATT 413139 Query 36659 TCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 36711 |||||| | ||||| || ||||| || |||||||| ||||| | ||| || || Sbjct 413140 TCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTC 413192 >seq28 Length=63775 Score = 111 bits (122), Expect = 2e-19 Identities = 176/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 66100 ||||| ||||| || ||||| || ||||| || | ||| || ||||| | || | || Sbjct 54197 CCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAAGAA 54256 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160 || ||||| | ||| ||| || || ||||||| ||| || || | |||| Sbjct 54257 CAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCAT 54316 Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 || || ||||| || || | ||| || || | | || || |||||||||||||| Sbjct 54317 GATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCC 54376 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCATTGG 66279 |||||| | ||||| || |||||||| | ||| |||||||||||| |||| || || | Sbjct 54377 CTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAACATTGGAACTAAT-CCGTTTG 54435 Query 66280 ATGTACCATT 66289 | || ||||| Sbjct 54436 AGGTGCCATT 54445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172363960520