Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10 269 4e-67 seq13 250 4e-61 seq28 107 3e-18 >seq10 Length=432243 Score = 269 bits (298), Expect = 4e-67 Identities = 579/859 (67%), Gaps = 10/859 (1%) Strand=Plus/Plus Query 49690 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 49749 || |||||||| || || |||||| |||| || || || ||||| || || || || ||| Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422 Query 49750 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCT 49809 || ||||| |||| || || ||||| | || ||||||||| || || || || Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTCG 412482 Query 49810 ATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAACTGGAAGAGCCGCAGT 49868 | ||| ||||| ||||| |||||||| | ||| || |||| | || | || Sbjct 412483 ACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTG-CTGGCAAGGCATCGGT 412541 Query 49869 AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA-ACGGTTTCTTCAC 49927 || |||||| |||||| | || || || || ||||| ||| ||| | || Sbjct 412542 AAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCT-TCTCCACGATAGCTGGGT 412600 Query 49928 TCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 49987 | ||| | || || |||| ||| || || || || ||||| ||| |||| Sbjct 412601 TTGGTCTGTTGTTCAAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGT 412660 Query 49988 CTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 50047 |||| | ||| | ||||||||| ||||| || || ||||| | || | ||| || | || Sbjct 412661 CTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACC 412720 Query 50048 AAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAA 50107 | || || || ||||| || ||||| ||||| || ||||| || || |||||||| || | Sbjct 412721 AGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCA 412780 Query 50108 GTCTCTCTCCATAACTGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCT 50164 ||| || || | ||| ||| | | ||||| | ||||| |||||||||| Sbjct 412781 ATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCT 412840 Query 50165 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 50224 | || | ||||| || |||| || || || || | | ||| || ||| |||| Sbjct 412841 TCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTT 412900 Query 50225 TAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCT 50284 | | || | |||||||| | | || ||||||| || |||||||| || |||| Sbjct 412901 TGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCT 412960 Query 50285 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTA 50344 | ||||||||||||||| | ||||| | ||||| || || | | |||| || | | Sbjct 412961 GGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCA 413020 Query 50345 AATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 50404 | || ||||| || |||||||| || ||||| || ||||| || || || Sbjct 413021 AGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAAGA 413080 Query 50405 GTTTTTCGTTGGGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTT 50461 | | |||||| || | | || ||||| || ||||| ||||| || | || | || Sbjct 413081 ATCTCTCGTTGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATTT 413140 Query 50462 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 50521 ||||| | ||||| || ||||| || |||||||| ||||| | ||| || || | || | Sbjct 413141 CTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTCGTTGTACT 413200 Query 50522 GGATTGGGAAAATAACAAA 50540 ||| ||||| | ||||| Sbjct 413201 TGATAGGGAACAACACAAA 413219 >seq13 Length=360411 Score = 250 bits (276), Expect = 4e-61 Identities = 1154/1814 (64%), Gaps = 39/1814 (2%) Strand=Plus/Minus Query 78757 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTG 78816 |||||||| ||||| || | || |||||||||| || ||||| || | || Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 78817 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 78876 | | || ||| || ||||| |||| || || ||||| || || || | Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCT 46457 Query 78877 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACT 78936 ||||| |||||||| | ||||| ||| || | |||||||| | |||||||| | Sbjct 46456 CTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAA 46397 Query 78937 CGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATC 78993 ||||| || || ||||| | |||| | |||||||||||| | || || || Sbjct 46396 CGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATG 46337 Query 78994 CTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATG 79049 | ||||| || | |||||||| | | || || || || || | | | || Sbjct 46336 TTGTTCTTCATATTGTCATTCCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTG 46281 Query 79050 CGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATA 79109 || ||||| | || || || || | | ||||| | | |||||| || || || Sbjct 46280 TGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTA 46221 Query 79110 TGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGC 79169 ||||| | |||| || || ||||| ||||||| ||| || || |||||||| || || Sbjct 46220 AGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGC 46161 Query 79170 CACCAATAAACTATTTCTAAGACCGTAT--GATCTGATTTTATCTTTTAGAGATTCCCAA 79227 || | ||| |||||| ||||||| | | | ||||| || | || ||||| Sbjct 46160 AACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGC--TTCAAAGTATCCCAG 46103 Query 79228 TCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAG-AATACCGTT-ACTAG 79285 ||||| | || || || | ||| | || || || | ||| || || || | Sbjct 46102 TCCCACAACTCGGATGGCTTTCTGTCCCACAAGTCGTACTGCAACAATCCCTTTGAC--G 46045 Query 79286 CGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCT 79345 | || ||| ||||| ||||| || ||||||| | || | || | || | Sbjct 46044 CAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGATGCTT 45985 Query 79346 CTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGC 79405 | | || | | ||||||||| ||||| |||| | || | |||| ||||| || Sbjct 45984 CCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCCTGGG 45925 Query 79406 TATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGA 79465 || || || | | ||| || || || || || | |||||||| |||| | | | Sbjct 45924 AGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAA 45865 Query 79466 TAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 79525 ||||||| | |||| |||| || || ||||| || ||| ||| |||| | || | Sbjct 45864 TAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAA 45805 Query 79526 TAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC-- 79583 | ||| | || | || || | || ||| ||| || | | || ||| | Sbjct 45804 TGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGT 45745 Query 79584 ------AAATCG-TCCATCTATTACAAACA-TGTT--CAACGCGACAGATGCCAGATTAC 79633 || | | | ||||| | ||| | || ||| || | || |||| |||| Sbjct 45744 ACCAGGAACTAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTAC 45685 Query 79634 AAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACT 79693 | || || || || | | | || | | || ||| || | |||| | | Sbjct 45684 AGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGATGATT 45625 Query 79694 TAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGA 79753 | || | || || || | ||| ||| | || |||||||| |||||||| || | |||| Sbjct 45624 TGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGA 45565 Query 79754 ACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA 79813 | ||||| || || ||| | || | ||| | || | | ||| | | ||||||| | Sbjct 45564 ATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGA 45505 Query 79814 TTATAGA-CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCT 79872 | || ||| | | || |||| || || | | || || ||| ||||| || Sbjct 45504 CGGTGGATCTTCCACGGCCTT-CTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCG 45446 Query 79873 CCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCA 79932 || | ||||| | || |||||| ||| | ||| | | ||| | ||| || || | Sbjct 45445 CCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTT 45386 Query 79933 TCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTT 79992 | | |||| ||||| || | ||| || ||||||||||| || | |||||||| | Sbjct 45385 TGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCT 45326 Query 79993 CTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 80052 ||| || || || || |||||| ||| |||| ||| | | ||| |||| |||| Sbjct 45325 CTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGC 45266 Query 80053 CACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTAT 80112 || || |||||||| || || | | | || || | ||||| || || || || | || Sbjct 45265 CAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAA 45206 Query 80113 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 80172 | || ||||| || |||| | || ||||||||| ||||| || || ||||| || || Sbjct 45205 CGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTA 45146 Query 80173 CCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 80232 || | || || ||| | | || || || | ||| || || || || Sbjct 45145 CCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCA 45086 Query 80233 ATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCA 80292 | || || ||||| |||||| ||||| || || || || || || ||| ||||| Sbjct 45085 CTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCC 45026 Query 80293 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 80352 ||||| || || ||||| ||||||||| | | || || ||||| || ||| Sbjct 45025 TTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAG 44966 Query 80353 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGAT 80412 || |||||| |||| ||||| || | | |||| | |||||| || || || | | Sbjct 44965 GTTGGAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGT 44906 Query 80413 TCTATATCCCATT--GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTT 80470 || || | |||| ||||| || ||||| || | ||| | || ||||| ||||||| Sbjct 44905 TCAATGT--CATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTT 44848 Query 80471 CAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAAT 80530 || | | ||| || | | | | |||||| ||| |||||||||| || ||||| || | Sbjct 44847 CAGCAACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGT 44788 Query 80531 AGTTGTA--TGAAA 80542 ||||||| ||||| Sbjct 44787 AGTTGTAGTTGAAA 44774 >seq28 Length=63775 Score = 107 bits (118), Expect = 3e-18 Identities = 213/310 (69%), Gaps = 4/310 (1%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA-CATTCGTCAGGACACATCAACGA 79919 ||||| || ||||| | || ||| ||| |||||| | || | || | || ||| Sbjct 54138 TCGAATTCCTCTCCATAGACGTCGCTTAAACCAGGAGCTTTACTTGGGGAAAATAAACT- 54196 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 ||||| ||| | || || || || ||||| || | ||| || ||||| | || | || Sbjct 54197 CCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAAGAA 54256 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 | ||||| | ||| || || || ||||||| ||| || || | |||| Sbjct 54257 CAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCAT 54316 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 || || ||||| || || | ||| || || | | |||||||||||||||||||| Sbjct 54317 GATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCC 54376 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCATTGG 80158 |||||| | ||||| || |||||||| | ||| |||||||||||| |||| || || | Sbjct 54377 CTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAACATTGGAACTAAT-CCGTTTG 54435 Query 80159 ATGTACCATT 80168 | || ||||| Sbjct 54436 AGGTGCCATT 54445 Score = 86.0 bits (94), Expect = 9e-12 Identities = 314/484 (65%), Gaps = 6/484 (1%) Strand=Plus/Plus Query 79054 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGT 79113 || ||||| |||||||| || || | || || ||| ||||||| || || | || Sbjct 53316 TTGACTACCTGAAATTCACCTGAAAGGACCCTGCGATTGTAAATGTTCGATGTGAAAGGC 53375 Query 79114 TCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACC 79173 || | | |||||| ||| |||||||| | || || ||||| ||||| | || || Sbjct 53376 TCAAAACACTCATTAAATCCTAAAATTTGTGATGTAGAGGCCGTGGGCATTGCAGCAACA 53435 Query 79174 AATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAA 79233 | |||| ||||| | ||||| | | || || || || |||||||| | Sbjct 53436 AGTAAAGAGTTTCTTAAGCCGTACTTCTTTACTTGCTCCTTAAGCTCATCCCAATCATCA 53495 Query 79234 AGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGAT 79293 | | | ||| || |||||| | |||| |||| || |||| || || |||| Sbjct 53496 AAAAAATCCGGTTCATAATTCCACAAATCAAATTGGAGTTTACCCTTTGATGCTGGTGAT 53555 Query 79294 CCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATG-C 79352 ||| | | ||||||| || | || || || ||| || || || | |||| | Sbjct 53556 CCTTCGAAACTTTCATAGTAACCCTTCTCTTTGGATAACTC-CATAGAGCTTTCAATGGC 53614 Query 79353 TCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAA 79412 | | | ||||| ||||| ||||||| |||| || | |||||| || ||||| Sbjct 53615 TGCATGGTAAATAGTTTCAAAAATCTGGCTATTAAGGGTTGCTGCTTCAGCACTGTCAAA 53674 Query 79413 TGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTC 79471 || |||| ||| | ||| | || |||| |||||||||||||| | ||||| | Sbjct 53675 GGG-TAATCGAAGTTCTAAAAAAGTATCAGCTAGCCCTTGAACACCAATCGCAATAGGAC 53733 Query 79472 TATGTCTCTTATTAGAAATTTCAGC-TTCTGGAATAGGATAATAATTAATATCTATAATT 79530 ||||||| ||| || | || || ||| ||||||||| | | | ||| |||| | Sbjct 53734 GATGTCTCAAATTGGATACTTTTGCACTCT-TAATAGGATACTTTGTTACATCAATAACT 53792 Query 79531 TTAT 79534 ||| Sbjct 53793 CTAT 53796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268324146920