Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq10 134 1e-26 >seq10 Length=432243 Score = 134 bits (148), Expect = 1e-26 Identities = 465/716 (65%), Gaps = 16/716 (2%) Strand=Plus/Plus Query 13595 AACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAA 13654 |||||| || || || ||||| || || ||| ||| || || || |||||||| || || Sbjct 412356 AACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAA 412415 Query 13655 TGGATTTATTGACAT---AAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGC 13711 ||| || | ||||| |||| ||| | | || || | | || |||||||| || Sbjct 412416 TGGGTTGGT-GACATTGTAAAC-CTTCTTGTTACCCAAGGCCACA-AGCAATCTATCGGC 412472 Query 13712 AATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAAT 13771 || ||||| | ||||| |||| || ||||| ||||| || | | || | || | Sbjct 412473 AACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTGCTGGCAA 412532 Query 13772 TATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAAT 13831 || ||| || |||||||||| |||| || ||||| | ||||| | | || Sbjct 412533 GGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCTTCTCCACGAT 412592 Query 13832 CTCA---TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATG 13888 | || | | | | || || || || | || || ||||| ||| || Sbjct 412593 AGCTGGGTTTG--GTCTGTTGTTCAAG-TGAGAGAACAACAAGCAGGCAAAGTCAGTGTG 412649 Query 13889 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 13948 | || || ||||| | ||| | |||||| || || || | || |||||||| |||| Sbjct 412650 CAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCT 412709 Query 13949 tttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGC 14008 || || ||||| || || | ||||| || || || ||||| || || || || ||||| Sbjct 412710 CTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGC 412769 Query 14009 AAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCA 14068 ||| || | |||| ||| ||||| | || | | || | |||||| | ||||| Sbjct 412770 AAAGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCA 412829 Query 14069 TTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTC 14128 || | || || ||||| || || |||| ||||| || || ||| | || ||| Sbjct 412830 CTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTC 412889 Query 14129 TTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTT 14186 ||||| | |||| |||| | || || | || || |||| ||||| |||||| Sbjct 412890 TTTAGGGTCTTTGA--TGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTT 412947 Query 14187 TCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAA 14246 ||||| ||||| || || || || ||| | || || | || || || | || Sbjct 412948 TCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAA 413007 Query 14247 AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14302 || | || |||| || ||||| || || || || ||| ||||| || ||||| Sbjct 413008 AAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAA 413063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727682180200