Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq10 134 1e-26
>seq10
Length=432243
Score = 134 bits (148), Expect = 1e-26
Identities = 465/716 (65%), Gaps = 16/716 (2%)
Strand=Plus/Plus
Query 13595 AACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAA 13654
|||||| || || || ||||| || || ||| ||| || || || |||||||| || ||
Sbjct 412356 AACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAA 412415
Query 13655 TGGATTTATTGACAT---AAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGC 13711
||| || | ||||| |||| ||| | | || || | | || |||||||| ||
Sbjct 412416 TGGGTTGGT-GACATTGTAAAC-CTTCTTGTTACCCAAGGCCACA-AGCAATCTATCGGC 412472
Query 13712 AATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAAT 13771
|| ||||| | ||||| |||| || ||||| ||||| || | | || | || |
Sbjct 412473 AACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTGCTGGCAA 412532
Query 13772 TATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAAT 13831
|| ||| || |||||||||| |||| || ||||| | ||||| | | ||
Sbjct 412533 GGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCTTCTCCACGAT 412592
Query 13832 CTCA---TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATG 13888
| || | | | | || || || || | || || ||||| ||| ||
Sbjct 412593 AGCTGGGTTTG--GTCTGTTGTTCAAG-TGAGAGAACAACAAGCAGGCAAAGTCAGTGTG 412649
Query 13889 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 13948
| || || ||||| | ||| | |||||| || || || | || |||||||| ||||
Sbjct 412650 CAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCT 412709
Query 13949 tttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGC 14008
|| || ||||| || || | ||||| || || || ||||| || || || || |||||
Sbjct 412710 CTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGC 412769
Query 14009 AAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCA 14068
||| || | |||| ||| ||||| | || | | || | |||||| | |||||
Sbjct 412770 AAAGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCA 412829
Query 14069 TTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTC 14128
|| | || || ||||| || || |||| ||||| || || ||| | || |||
Sbjct 412830 CTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTC 412889
Query 14129 TTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTT 14186
||||| | |||| |||| | || || | || || |||| ||||| ||||||
Sbjct 412890 TTTAGGGTCTTTGA--TGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTT 412947
Query 14187 TCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAA 14246
||||| ||||| || || || || ||| | || || | || || || | ||
Sbjct 412948 TCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAA 413007
Query 14247 AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14302
|| | || |||| || ||||| || || || || ||| ||||| || |||||
Sbjct 413008 AAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAA 413063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727682180200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |