Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq10 260 2e-64 seq13 248 1e-60 seq28 93.3 6e-14 >seq10 Length=432243 Score = 260 bits (288), Expect = 2e-64 Identities = 577/859 (67%), Gaps = 10/859 (1%) Strand=Plus/Plus Query 41795 TTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 41854 || |||||||| || ||||||||| |||| || || || ||||| || || || || ||| Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422 Query 41855 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCT 41914 || ||||| |||| || || ||||| | || ||||||||| || | ||| || Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTCG 412482 Query 41915 ATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAACTGGAAGAGCCACAGT 41973 | ||| ||||| ||||| |||||||| | ||| || |||| | || | || Sbjct 412483 ACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTG-CTGGCAAGGCATCGGT 412541 Query 41974 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT-ACTGTTTCTTCAC 42032 || |||||| |||||||| ||| || || || ||||| ||| || | || Sbjct 412542 AAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCT-TCTCCACGATAGCTGGGT 412600 Query 42033 TCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCAT 42092 | ||| | || || |||| ||| || || || || ||||| ||| || | Sbjct 412601 TTGGTCTGTTGTTCAAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGT 412660 Query 42093 CTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 42152 |||| | ||| ||||||||||| ||||| || || ||||| | || | ||| || | || Sbjct 412661 CTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACC 412720 Query 42153 AAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAA 42212 | || ||||| ||||| || ||||| ||||| || ||||| || || |||||||| | | Sbjct 412721 AGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCA 412780 Query 42213 GTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCT 42269 ||| || || | ||| ||| | | ||||| | ||||| |||||||||| Sbjct 412781 ATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCT 412840 Query 42270 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 42329 | || | ||||| || |||| || || || || | | ||| || ||| |||| Sbjct 412841 TCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTT 412900 Query 42330 TAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCT 42389 | | || | |||||||| | | || |||| || || |||||||| || |||| Sbjct 412901 TGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCT 412960 Query 42390 GAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTA 42449 | ||||||||||||||| ||||||| | | ||| || || | | |||| || | | Sbjct 412961 GGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCA 413020 Query 42450 AATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 42509 | || || || || |||||||| || ||||| || ||||| || || || Sbjct 413021 AGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAAGA 413080 Query 42510 ATTTTTC---GTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTT 42566 || | || ||| | || || ||||| || ||||| ||||| || | || | || Sbjct 413081 ATCTCTCGTTGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATTT 413140 Query 42567 CTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATT 42626 |||| | ||||| || |||||||| |||||||| ||||| | ||| || || | || | Sbjct 413141 CTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTCGTTGTACT 413200 Query 42627 GAATTGGGAAAATAACAAA 42645 || ||||| | ||||| Sbjct 413201 TGATAGGGAACAACACAAA 413219 >seq13 Length=360411 Score = 248 bits (274), Expect = 1e-60 Identities = 1178/1860 (63%), Gaps = 53/1860 (3%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 |||||||| || | || | || |||| ||| | | |||||||| || || || | Sbjct 46615 GTAAACTGGATCGCAGCAGCAGCAGCTTGCGTTCTCAAGTAGTACATACCCGTCTTCAAT 46556 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || ||||||||||||| ||||| || | || |||| |||| || || Sbjct 46555 CCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTACCCATAG-TAGGTTCTCTGAT 46497 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 ||| || |||| |||||| ||||| || || || | ||||| |||||||| | || Sbjct 46496 GTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCTCTGTCGGCAGCCATGTCAAT 46437 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 ||| ||| || | |||||||| | |||||||| | ||||| || || ||||| | Sbjct 46436 GATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAACGCTTGATTTCGTCTGGGAC 46377 Query 71040 GTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 |||| | |||||||||||| | ||||| || | || || || | ||||| Sbjct 46376 ATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATGTTGTTCTTCATATTGTCATT 46317 Query 71097 CCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATGAGGATTAACTACTTGAAATT 71152 ||| | | || || || || || | | | || || ||||| | || || | Sbjct 46316 CCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTGTGGGTTAACAATCTGGAACT 46261 Query 71153 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTAT 71212 | || | | ||||| | | |||||| || || || ||||| | | || || | Sbjct 46260 CGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTAAGGTTCAAAGCATTCGTTGT 46201 Query 71213 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAA 71272 | ||||| ||||||| ||| || || || ||||| || || || | | | |||||| | Sbjct 46200 TACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGCAACAAGCAAAGAATTTCTGA 46141 Query 71273 GACCATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG-TA 71329 |||| ||| | || | || | || | || ||||| | ||| | || ||||| | Sbjct 46140 GACCGTGT--TTGGCCAAATTTTGCTTCAAAGTATCCCAGTCCCACAACTCGGATGGCTT 46083 Query 71330 CAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTT-ACTAGCGTATGATCCTGCATATGTA 71388 || || || || || || ||| ||||||| Sbjct 46082 TCTGTCCCACAAGTCGTACTGCAACAATCCCTTTGAC--GCAGGAGAACCTTCATATGTC 46025 Query 71389 TCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATG 71448 || ||||| ||||| | | || || || | || || | || ||| ||||||| Sbjct 46024 TCATATGGACCTTCCTCCTGAGCAAGCTCGATAGATGCTTCCACAGCAGCATGATAAATG 45965 Query 71449 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAG 71508 || ||||| |||| | || | |||| |||||| || || || || | | ||| Sbjct 45964 GTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCCTGGGAGTCGAAAGGCAATCTCAAG 45905 Query 71509 AGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTA 71568 || || || || || | |||||||| |||| | | |||||||||| |||| |||| Sbjct 45904 GACATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTG 45845 Query 71569 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 71628 || || ||||| || ||| ||| |||| | || || ||| | || | ||||| Sbjct 45844 GATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTA 45785 Query 71629 ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA--TCTCCCATCTATTACAA 71686 | || ||| ||| || | | || |||||| | | ||| | || | Sbjct 45784 GTAACAACCTTGGTCACCTCGTGCAACTT------ATCAAAGTTGTACCAGGAACTAGAT 45731 Query 71687 ACA-CGTTC----------AAGGCAA--CA---GATGCCAGATTACAAACGGCTACCTCA 71730 || | ||| ||||||| || || |||| ||||| || || || || Sbjct 45730 GCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCT 45671 Query 71731 TTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 71790 | | | || | | ||| ||| || | ||| | ||||| | || || Sbjct 45670 TCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGATGATTTGATAATACCCAAG 45611 Query 71791 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTT 71850 || | ||| ||| | || |||||||| |||||||| || | || || ||||| || || Sbjct 45610 TTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATGGAGTTCCTGTC 45551 Query 71851 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTA 71909 ||| | || | ||| | || | | ||| | | ||||||| | | |||| | Sbjct 45550 TCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGACGGTGGATCTTCCA 45491 Query 71910 TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969 | || |||| || || | | || || ||| ||||| || || | ||| | Sbjct 45490 CGGCCTT-CTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGTAGACATCAGC 45432 Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTT 72029 || |||||| |||||| ||| | | ||| | ||| || || | | | |||| || Sbjct 45431 CAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTT 45372 Query 72030 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 72089 ||| || | ||| || ||||||||||| || | |||||||| |||| || || || Sbjct 45371 CATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTT 45312 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || |||||| ||| |||| ||| | | ||| |||| |||||| || |||||||| Sbjct 45311 ACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTA 45252 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 || || | | | || |||| ||||| || || || || | || | || ||||| || Sbjct 45251 AATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTGCTGTGTTGTT 45192 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 |||| | || ||||||||| ||||| || || | ||| || || || | || || Sbjct 45191 GAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGC 45132 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 ||| | | || ||| || | ||| || || || || | || || ||||| Sbjct 45131 GCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAA 45072 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 |||||| ||||| || || || || || || || |||||| ||||| || || Sbjct 45071 AGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAG 45012 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 ||||| ||||||||| | | || || ||||| || ||||| |||||| |||| Sbjct 45011 GAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTG 44952 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT- 72508 ||||| || | | |||| | |||||| || || || | ||| || | |||| Sbjct 44951 AGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAATGT--CATTC 44894 Query 72509 -GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTA 72567 || || || ||||| || | ||| | || |||||| ||||||||| | | ||| Sbjct 44893 CCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTTCAGCAACCTTCCCG 44834 Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 72625 || | | | | |||||| ||| |||||||||| || ||||| || |||||||| ||||| Sbjct 44833 TTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAA 44774 >seq28 Length=63775 Score = 93.3 bits (102), Expect = 6e-14 Identities = 172/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062 ||||| ||| | || || || || ||||| || | ||| || ||||| | || | || Sbjct 54197 CCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAAGAA 54256 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 | ||||| | ||| || || || ||||||| ||| || || | |||| Sbjct 54257 CAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCAT 54316 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 || || ||||| || || | ||| || || | | ||||| |||||||||||||| Sbjct 54317 GATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCC 54376 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCATTGG 72241 |||||| | ||||| || |||||||| | ||| |||||||||||| |||| || || | Sbjct 54377 CTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAACATTGGAACTAAT-CCGTTTG 54435 Query 72242 ATGCACCATT 72251 | | ||||| Sbjct 54436 AGGTGCCATT 54445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138755370280