Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq10 172 8e-38
seq13 93.3 6e-14
>seq10
Length=432243
Score = 172 bits (190), Expect = 8e-38
Identities = 558/862 (65%), Gaps = 11/862 (1%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| || |||| ||| | || |||||| |||||||||||||||| | || || || |
Sbjct 413212 TGTTCCCTATCAAGTACAACGAGATTTGGCAAATGTACAAAAAGGCCGAAGCATCTTTCT 413153
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||||| | || |||| || ||| | |||| ||| ||| | ||||||
Sbjct 413152 GGACTGCGGAAGAAATTGACTTGTCGAAAGACATCAACGACTGGAAGAACAGAATGACTG 413093
Query 125116 AAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
| | ||| || || || || || | | ||||| |||||||| | || || |||||
Sbjct 413092 ACAACGAGAGATTCTTCATCTC-CAGAGTGTTGGCTTTCTTTGCTGCTTCGGACGGAATT 413034
Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234
||||| || || || || || ||| ||| | || ||||||| ||
Sbjct 413033 GTCAATGAGAACTTGGTGGAGAACTTTTCTGCTGAGGTCCAGATCCCAGAGGCCAAATGT 412974
Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294
|| ||||||||||| |||||||| || ||| | |||||||||| |||||| ||||
Sbjct 412973 TTCTACGGATTCCAGATCATGATGGAAAACATCCACTCGGAAACCTACTCTTTGTTGATC 412914
Query 125295 GACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTG 125354
||| ||||| || || || || | | || ||||| ||||| | |
Sbjct 412913 GACTCCTACATCAAAGACCCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGAAAACATC 412854
Query 125355 CCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCG 125414
|| | || || ||||| | |||| | | ||||||| |||||| || | | |
Sbjct 412853 CCTTGCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGACGACGAGGCCTTG 412794
Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474
| ||||| ||| ||||||| || || || || || || || ||||| || || |||
Sbjct 412793 TTTGCCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTT 412734
Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534
|| | ||||| ||| | |||||| | || | ||||| || || ||| | |||||
Sbjct 412733 GCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTCCAACGAA 412674
Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTAT 125594
|| || | ||||||| || | ||| |||||||||| | || | ||| ||
Sbjct 412673 TTGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCC-TGCTTGTTGTTC---TCTCA 412618
Query 125595 CTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTG 125654
|| | || || | ||||| || || || ||| | || || |||||
Sbjct 412617 CTTGAACAACAGACCAAACCCAGCTAT-----CGTGGAGAAGATTATTACTGAGGCCGTC 412563
Query 125655 AGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGC 125714
| || ||| |||| | | ||||| || | || | ||| || | || ||||||||
Sbjct 412562 ACTATTGAAAAAGAATACTTTACCGATGCCTTGCCAGCAAGCTTGTTGGGAATGAACTGT 412503
Query 125715 AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC 125774
| | |||||| | ||| | ||||| || || ||| | | || | ||| | |
Sbjct 412502 GACTTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTGTGGCCTTGGGTAAC 412443
Query 125775 CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834
||| ||||||| | || || || || || || ||| | ||| || | | ||
Sbjct 412442 AAGAAGGTTTACAATGTCACCAACCCATTCGACTTTATGGAGAACATTTCCTTGGCAGGA 412383
Query 125835 AAGACCAACTTTTTCGAGAAGA 125856
||||||||||||||||||||||
Sbjct 412382 AAGACCAACTTTTTCGAGAAGA 412361
>seq13
Length=360411
Score = 93.3 bits (102), Expect = 6e-14
Identities = 116/159 (73%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
|| || ||||| || ||||||||||| | || | |||||||| |||||||| || |||
Sbjct 45216 CAAGGTGGCAACAAGAGGCCAGGCGCTTTTGCGATTTACTTGGAGCCTTGGCATGCTGAC 45275
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|||| ||||| ||||| || | || ||| || ||||| ||||||| ||
Sbjct 45276 ATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTAGAGCCAGAGAT 45335
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAG 97034
||||| ||| || ||| | || |||||||||||||||
Sbjct 45336 TTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATGAAG 45374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058709048280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |