Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq10 172 8e-38 seq13 93.3 6e-14 >seq10 Length=432243 Score = 172 bits (190), Expect = 8e-38 Identities = 558/862 (65%), Gaps = 11/862 (1%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || |||| ||| | || |||||| |||||||||||||||| | || || || | Sbjct 413212 TGTTCCCTATCAAGTACAACGAGATTTGGCAAATGTACAAAAAGGCCGAAGCATCTTTCT 413153 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||||| | || |||| || ||| | |||| ||| ||| | |||||| Sbjct 413152 GGACTGCGGAAGAAATTGACTTGTCGAAAGACATCAACGACTGGAAGAACAGAATGACTG 413093 Query 125116 AAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 | | ||| || || || || || | | ||||| |||||||| | || || ||||| Sbjct 413092 ACAACGAGAGATTCTTCATCTC-CAGAGTGTTGGCTTTCTTTGCTGCTTCGGACGGAATT 413034 Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234 ||||| || || || || || ||| ||| | || ||||||| || Sbjct 413033 GTCAATGAGAACTTGGTGGAGAACTTTTCTGCTGAGGTCCAGATCCCAGAGGCCAAATGT 412974 Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294 || ||||||||||| |||||||| || ||| | |||||||||| |||||| |||| Sbjct 412973 TTCTACGGATTCCAGATCATGATGGAAAACATCCACTCGGAAACCTACTCTTTGTTGATC 412914 Query 125295 GACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTG 125354 ||| ||||| || || || || | | || ||||| ||||| | | Sbjct 412913 GACTCCTACATCAAAGACCCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGAAAACATC 412854 Query 125355 CCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCG 125414 || | || || ||||| | |||| | | ||||||| |||||| || | | | Sbjct 412853 CCTTGCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGACGACGAGGCCTTG 412794 Query 125415 TACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTT 125474 | ||||| ||| ||||||| || || || || || || || ||||| || || ||| Sbjct 412793 TTTGCCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTT 412734 Query 125475 GCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAG 125534 || | ||||| ||| | |||||| | || | ||||| || || ||| | ||||| Sbjct 412733 GCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTCCAACGAA 412674 Query 125535 TTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTAT 125594 || || | ||||||| || | ||| |||||||||| | || | ||| || Sbjct 412673 TTGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCC-TGCTTGTTGTTC---TCTCA 412618 Query 125595 CTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTG 125654 || | || || | ||||| || || || ||| | || || ||||| Sbjct 412617 CTTGAACAACAGACCAAACCCAGCTAT-----CGTGGAGAAGATTATTACTGAGGCCGTC 412563 Query 125655 AGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGC 125714 | || ||| |||| | | ||||| || | || | ||| || | || |||||||| Sbjct 412562 ACTATTGAAAAAGAATACTTTACCGATGCCTTGCCAGCAAGCTTGTTGGGAATGAACTGT 412503 Query 125715 AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC 125774 | | |||||| | ||| | ||||| || || ||| | | || | ||| | | Sbjct 412502 GACTTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTGTGGCCTTGGGTAAC 412443 Query 125775 CGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGT 125834 ||| ||||||| | || || || || || || ||| | ||| || | | || Sbjct 412442 AAGAAGGTTTACAATGTCACCAACCCATTCGACTTTATGGAGAACATTTCCTTGGCAGGA 412383 Query 125835 AAGACCAACTTTTTCGAGAAGA 125856 |||||||||||||||||||||| Sbjct 412382 AAGACCAACTTTTTCGAGAAGA 412361 >seq13 Length=360411 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || ||||| || ||||||||||| | || | |||||||| |||||||| || ||| Sbjct 45216 CAAGGTGGCAACAAGAGGCCAGGCGCTTTTGCGATTTACTTGGAGCCTTGGCATGCTGAC 45275 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 |||| ||||| ||||| || | || ||| || ||||| ||||||| || Sbjct 45276 ATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTAGAGCCAGAGAT 45335 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAG 97034 ||||| ||| || ||| | || ||||||||||||||| Sbjct 45336 TTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATGAAG 45374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058709048280