Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq10 158 3e-33
seq14 127 5e-24
>seq10
Length=432243
Score = 158 bits (174), Expect = 3e-33
Identities = 385/567 (68%), Gaps = 26/567 (5%)
Strand=Plus/Minus
Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801
||||||||| |||||| || ||||| ||||||| |||||| | || |||| | |||
Sbjct 413180 ATGTACAAAAAGGCCGAAGCATCTTTCTGGACTGCGGAAGAAATTGACTTGTCGAAAGAC 413121
Query 268802 TTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGA-AGATTTAT-ATCTT-ATATTCTT 268858
| | || ||||| || || | || || || ||||| | |||| | | | ||
Sbjct 413120 ATCAACGACTGGAAGAACAGAATGACTGAC-AACGAGAGATTCTTCATCTCCAGAGTGTT 413062
Query 268859 GCGTTT-TTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCA 268917
| ||| ||||| | | || || || || || || || | || ||||| || | |
Sbjct 413061 GGCTTTCTTTGCTGCTTCGGACGGAATTGTCAATGAGAACTTGGTGGAGAACTTTTCTGC 413002
Query 268918 AGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATAT 268977
||||| ||||| || || |||| |||||| |||||||||||||| || ||||| ||
Sbjct 413001 TGAGGTCCAGATCCCAGAGGCCAAATGTTTCTACGGATTCCAGATCATGATGGAAAACAT 412942
Query 268978 TCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAA 269037
|| || || | ||| | | || || || | || || | || | |||||
Sbjct 412941 CCACTCGGAAACCTACTCTTTGTTGATCGACTCCTACATCAAAGAC-----CCTAAAGAG 412887
Query 269038 AA-GACTATTTTCTTC-----TAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAAT 269090
|||| |||| ||| ||| || ||| || || | | || || | || |
Sbjct 412886 GCTGACT-TTTTGTTCAACGCTATCGAAAAC-ATCCCTTGCATTAAGAAGAAGGCCGAGT 412829
Query 269091 GGGCTCTGAAATGGAT---AAACGATAGCGCGCCTTAC--GGAGAAAGGTTAGTTGCTTT 269145
|||| ||| |||||| | |||| | | ||||| | ||||| || || || ||
Sbjct 412828 GGGCCTTGAGATGGATCGCAGACGAC-GAG-GCCTTGTTTGCCGAAAGATTGGTGGCCTT 412771
Query 269146 TGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAA 269205
||| ||||| |||||||| ||||| || || || |||||| ||||||| |||||||||||
Sbjct 412770 TGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAA 412711
Query 269206 AAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTT 269265
||||| | ||||| || | || ||||| ||||||||||| |||| |||||||||||
Sbjct 412710 GAGAGGTTTGATGCCTGGTCTTACGTTCTCCAACGAATTGATTTGCAGAGACGAAGGTTT 412651
Query 269266 ACACTGCGACTTCGCTTGTTTATTATT 269292
||| ||||| || || || || ||
Sbjct 412650 GCACACTGACTTTGCCTGCTTGTTGTT 412624
>seq14
Length=288459
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || |||||||| |||||||| || |||||||| | |||||||||||||| | |||
Sbjct 84643 TGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGC 84702
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||| || || | || || || ||||| || ||||| || || || || |||||
Sbjct 84703 TTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTCTTGGATCTTG 84762
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || ||||| || | || ||| || ||| || |||| || || |||||||||||
Sbjct 84763 GACTTAACATTGTCAATTGTGTCGGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTC 84822
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
| || || || || || |||||
Sbjct 84823 AAAGTCTTAACGAAAATTTGCAT 84845
Score = 123 bits (136), Expect = 6e-23
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || || || || || || || ||||| || | |||||||||||||| | |||
Sbjct 84871 TGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTGC 84930
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||||||||| | || || || |||||||| ||||| || ||||| || |||||
Sbjct 84931 TTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTATCTTGGATCTTG 84990
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| || || || || | || ||| || ||| || || | ||| || ||||| || ||
Sbjct 84991 GACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATGGTCTTGCCGGTC 85050
Query 104537 AGTGTTTTTACAAATATCTGCATTTTGT 104564
| ||||| ||||| || |||||| |||
Sbjct 85051 AAGGTTTTAACAAAGATTTGCATTATGT 85078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397618128524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |