Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 2e-13 >seq10 Length=432243 Score = 91.5 bits (100), Expect = 2e-13 Identities = 260/400 (65%), Gaps = 0/400 (0%) Strand=Plus/Minus Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGAT 7066 |||| || ||||| || ||||| |||||||||||| | | | || | |||| Sbjct 317226 CATAGAACTGACAAAAGACATGGCATGGAGGTAAAGCCATTTTGGGGAAGTCTGGGGGAT 317167 Query 7067 TCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTA 7126 ||||||||| ||| | ||| | |||||| | |||||| || || | |||| | || | Sbjct 317166 TCCAAGCAGACATAATAATTCTTCTATCGTATGGATTAGTCTTGAGTTTTTTAATCACGT 317107 Query 7127 TTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTC 7186 || | || || | |||||||| || | | | |||| | | || | ||| | Sbjct 317106 CCTGGAGCTGGTCGAAGCCCTGACCAGAGTAGTCATCGTCACAAGTCTTGTATTCAGCAC 317047 Query 7187 CAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAA 7246 |||| || | |||||| || || |||| |||||| || || |||||| |||| | | | Sbjct 317046 CAAAGTGACGCCATTGGAAGCCGTAAACAGGACCCAAGTCGCCTTCTCTGCGATCAGTTA 316987 Query 7247 ATCCTAATCGATTTAAATTAGATTTTGATCCATAAGCATCCCAAATATGTACAGAttttt 7306 | || | | || |||| | | || |||| | |||||||| | || |||| Sbjct 316986 AACCCATTTTATCCAAATATTCTCTCGAACCATTTCCCTCCCAAATCCGAACGCCTTTTG 316927 Query 7307 ttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTC 7366 || || ||| || || ||| | |||| | ||||| | ||| || | | ||| | Sbjct 316926 CAGACAACTTTTTAGCATCAGTACAACCTTCCACAAACCAGAGAAGCTCGTGGATTATGC 316867 Query 7367 CACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGT 7406 | |||||| ||| ||||| || || | ||| || || Sbjct 316866 CCTTTGAAAACACTCTCTTTGTGGTTAAGAGAGGAAAAGT 316827 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 6829 ATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATA 6888 || ||||||| |||| ||| ||||| || | || || || ||||| || | |||| Sbjct 317461 ATGTGATCTAGGTAAACATGGGCATCGCCCAATGTGTGGATGAATTCGCCACAGTCCATA 317402 Query 6889 TCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACA 6948 |||||| | |||||||| | | || |||||||||||||| || | ||||| || || Sbjct 317401 TCAACAACATGAGCAATCATTTTGGTCAATAATGCATAAGACGCAATGTTAAAGGGAACT 317342 Query 6949 CCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAA 6992 || | ||||| || ||||| ||||| | |||| ||||| Sbjct 317341 CCGAGGCCCATGTCGCAAGATCTCTGATATAAGAGACATGATAA 317298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871605234800