Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 seq14 145 7e-30 >seq1 Length=1779567 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||||||||||||||| |||||||||||||| | ||| || ||| | Sbjct 999704 CCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 999645 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || || ||||||| || || ||| ||||||| ||||||||||| || || ||| Sbjct 999644 AAGGTTCTGCCGTCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGA 999585 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | || || | ||| || | ||| ||||||| | ||||| Sbjct 999584 ATACCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGACC 999525 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || ||||| || || || | ||| || |||||||| ||||| Sbjct 999524 TCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478 >seq14 Length=288459 Score = 145 bits (160), Expect = 7e-30 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| |||||||||||||||||| || |||||||| | ||| | Sbjct 84383 TTTGCATACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGT 84442 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | ||| || ||| || || |||| || || || | ||||| ||||||||||| | Sbjct 84443 AGTCGGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGT 84502 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 |||||||||| ||||| ||||| | |||||| | || ||| | | | ||||||| Sbjct 84503 CTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGATTTAACGTTGTCAATGGTGTCAGAAG 84562 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | |||||||| || || || | ||| || || ||||| ||||| Sbjct 84563 ACTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617 Score = 136 bits (150), Expect = 4e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 ||| ||||| ||| |||||||||| |||||||||||||||||| |||||||| || | Sbjct 83922 AAACTTTTAGTTTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAAT 83981 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || ||| || ||| || ||| |||| || || || | ||||| |||||||| Sbjct 83982 GTTGTAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTG 84041 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| || || ||||| || || ||||| | || || | ||| || | ||| |||||| Sbjct 84042 CTGGTCAGGTGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTC 84101 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| || || || | ||| || || ||||| ||||| Sbjct 84102 GGACGATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161 Score = 129 bits (142), Expect = 5e-25 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| |||||||||||||||||| || |||||||| | | Sbjct 84835 AAAATTTGCATACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATG 84894 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || ||| || || | || |||| || || || |||| || ||||||||| Sbjct 84895 TTGTAGTCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGC 84954 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || || |||||||| || || || || | || || | ||| ||| | ||| |||||| Sbjct 84955 TGGTCAGGAGGAATTCCCTCCTTATCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCG 85014 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | |||||||| || || || | ||||| |||||||| ||||| Sbjct 85015 GAAGATTCAACTTCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073 Score = 127 bits (140), Expect = 2e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| |||||||||||||||||| || |||||||| | ||| | Sbjct 84155 TTTGCATACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGT 84214 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | ||| || ||| || || |||| || || || | ||||| ||||||||||| | Sbjct 84215 AGTCGGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGT 84274 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || ||||| || || ||||| | || || | ||| || | ||| |||||| | Sbjct 84275 CAGGTGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACG 84334 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | |||||||| || || || | ||| || || ||||| ||||| Sbjct 84335 ATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| ||| ||||||||||| ||||||||||| || | ||| | Sbjct 84611 TTTGCATACCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGT 84670 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || || | || |||| || || || | ||||| ||||||||||| | Sbjct 84671 AGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGT 84730 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || || || || || ||||| | || || | ||| || | | | ||||| | Sbjct 84731 CAGGTGGGATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAG 84790 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | |||||||| || ||||| | ||| || || || || ||||| Sbjct 84791 ATTCAACTTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290903007080