Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq11 111 2e-20 seq6 98.7 2e-16 >seq11 Length=428666 Score = 111 bits (122), Expect = 2e-20 Identities = 188/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| | | |||| | |||| ||||| ||||| ||||| |||||||||| Sbjct 703 CGCTAAGCGTCACAGAAAAATCT-TGAGAGACAACATTCAAGGTATCACTAAGCCAGCTA 761 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || | | |||| | | ||||| || |||||| |||||| ||| |||| || || Sbjct 762 TCAGAAGATTGGCGAGAAGAGGTGGTGTTAAGCGTATCTCTGCTTTGATCTACGAGGAAG 821 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 | | | ||| | ||| |||| | | | ||||||| || ||| || || || | Sbjct 822 TCAGAGGTGTCCTTAAGTCCTTCTTGGAAAACGTTATCAGAGACGCTGTCACTTACACTG 881 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | |||||||| || || | ||| ||||||| || ||||| | |||| Sbjct 882 AGCACGCCAAGAGAAAGACTGTTACATCTCTTGATGTCGTCTACGCTTTGAAGAGACAAG 941 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | | |||||||| || ||| || Sbjct 942 GTAGAACCTTGTATGGTTTCGGTGGTTGAT 971 >seq6 Length=705841 Score = 98.7 bits (108), Expect = 2e-16 Identities = 186/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | |||| | |||| ||||| ||||| || || |||||||| || Sbjct 397007 GCTAAGCGTCACAGAAAAATCT-TGAGAGACAACATTCAAGGTATTACAAAGCCAGCCAT 397065 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| || |||||| | |||| ||| | || ||||| | Sbjct 397066 CAGAAGATTGGCGAGAAGAGGTGGTGTTAAGCGTATTTCTGCTTTGATTTACGAAGAAGT 397125 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| | ||| |||| | ||| ||||||| || ||| | || || || Sbjct 397126 CAGAGGTGTCCTCAAGTCCTTCTTGGAGAACGTTATCAGAGACGCTGTTACTTACACTGA 397185 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||||||||| || | ||| ||||||| || ||||| | ||||| Sbjct 397186 GCACGCCAAGAGAAAGACTGTCACATCTCTTGATGTCGTCTACGCTTTGAAGAGACAAGG 397245 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | || ||||| || ||||| || Sbjct 397246 TAGAACCTTGTACGGTTTCGGTGGTTAAGCT 397276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075151541729