Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq13 304 2e-77 seq10 275 8e-69 seq28 111 2e-19 >seq13 Length=360411 Score = 304 bits (336), Expect = 2e-77 Identities = 1157/1810 (64%), Gaps = 31/1810 (2%) Strand=Plus/Minus Query 62034 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 62093 |||||||| ||||| || | || ||||||||||||| ||||| || | || Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 62094 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 62153 | | || ||| || ||||| |||| || || ||||| || || || | Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCT 46457 Query 62154 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACT 62213 ||||| |||||||| | ||||| ||| || | |||||||| | |||||||| | Sbjct 46456 CTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAA 46397 Query 62214 CGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATC 62270 ||||| || || ||||| | |||| | |||||||||||| | || || || Sbjct 46396 CGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATG 46337 Query 62271 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATG 62326 | ||||| || | |||||||| | | || || || || || | | | || Sbjct 46336 TTGTTCTTCATATTGTCATTCCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTG 46281 Query 62327 CGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATA 62386 || ||||| | || || || || | | ||||| | | |||||| || || || Sbjct 46280 TGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTA 46221 Query 62387 CGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62446 ||||| | | || || || ||||| ||||||| ||| || || || ||||| || || Sbjct 46220 AGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGC 46161 Query 62447 CACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATT 62506 || | ||| |||||| ||||||| | | | || | || | || ||||| | Sbjct 46160 AACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATCCCAGTC 46101 Query 62507 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG-AATACCGTTACTGGCGT 62565 ||| | || || || || | ||| || || | | Sbjct 46100 CCACAACTCGGATGGCTTTCTGTCCCACAAGTCGTACTGCAACAATCCCTTTGACGCAGG 46041 Query 62566 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 62625 | || ||| ||||||| || ||||| ||||||| || ||| || || | || || | Sbjct 46040 A-GAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGATGCTTCCA 45982 Query 62626 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTAT 62685 ||| | | ||||||||| ||||| |||| | || | |||| |||||| || | Sbjct 45981 CAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCCTGGGAGT 45922 Query 62686 CAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAG 62745 | || || | | ||| || || || || || | |||||||| |||| | | |||| Sbjct 45921 CGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAG 45862 Query 62746 GTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 62805 |||| | |||| |||| || || ||||| || ||| ||| |||| | || || | Sbjct 45861 GTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGA 45802 Query 62806 TTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC----- 62860 || | || | ||||| || || ||| ||| || | || || ||| | Sbjct 45801 TTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTACC 45742 Query 62861 ---AAATCGCC-CATCTATTACAAACA-TGTT--CAAGGCAACAGATGCCAGATTACAAA 62913 || | | ||||| | ||| | || ||| |||| || |||| ||||| | Sbjct 45741 AGGAACTAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGA 45682 Query 62914 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 62973 | || || || | | | || | | |||||| || | ||| | |||| Sbjct 45681 CAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGATGATTTGA 45622 Query 62974 TAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 63033 || | || || || | ||| ||| | || |||||||| |||||||| || | ||||||| Sbjct 45621 TAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATG 45562 Query 63034 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 63093 |||| || || ||| | || | ||| | || | | ||| | | ||||||| | Sbjct 45561 GAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGACGG 45502 Query 63094 TAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCC 63153 | ||| | | | |||||| || || | ||||| ||| ||||| || || Sbjct 45501 TGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGT 45442 Query 63154 AAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 63213 | |||| |||| |||||| ||||| ||| | | ||| | ||| || |||| | | Sbjct 45441 AGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTT 45382 Query 63214 TCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTAT 63273 |||| ||||| || | ||| || ||||||||||| || | |||||||| |||| Sbjct 45381 CAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAA 45322 Query 63274 GTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 63333 ||| || || || |||||| ||| |||| ||| | | ||| |||| |||||| | Sbjct 45321 TTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAG 45262 Query 63334 GTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63393 | |||||||| || || | | | || |||| ||||| || || || || | || | | Sbjct 45261 GCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTG 45202 Query 63394 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG 63453 | ||||| || |||| | || ||||||||| |||||||| || |||| || ||||| | Sbjct 45201 CTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTG 45142 Query 63454 AGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTT 63513 || || ||| | | || || || | ||| || || || || | | Sbjct 45141 CAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCT 45082 Query 63514 TAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCA 63573 | || ||||| |||||| ||||| ||||| || ||||| || ||| ||||| ||| Sbjct 45081 TGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCA 45022 Query 63574 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 63633 || || || ||||| ||||||||| | | || || ||||| || ||||| | Sbjct 45021 TGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTG 44962 Query 63634 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63693 ||||| |||| ||||| || | | || | | |||||| || || || | || | Sbjct 44961 GAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAA 44902 Query 63694 TATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63751 | | |||| ||||| || || || || | ||| | || ||||| ||||||||| | Sbjct 44901 TGT--CATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTTCAGC 44844 Query 63752 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63811 | ||| ||| | | | | |||||| ||| |||||||||| || ||||| || ||||| Sbjct 44843 AACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 44784 Query 63812 GTA--TGAAA 63819 ||| ||||| Sbjct 44783 GTAGTTGAAA 44774 >seq10 Length=432243 Score = 275 bits (304), Expect = 8e-69 Identities = 582/863 (67%), Gaps = 18/863 (2%) Strand=Plus/Plus Query 33034 TTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTG 33093 || |||||||| || || |||||| |||| || || || ||||| || || || || ||| Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422 Query 33094 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCT 33153 || ||||| |||| || || ||||| | || ||||||||| || ||||| || Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTCG 412482 Query 33154 ATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAACTGGAAGAGCCGCAGT 33212 | ||| ||||| ||||| |||||||| | ||| || |||| | || | || Sbjct 412483 ACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTG-CTGGCAAGGCATCGGT 412541 Query 33213 AAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA-ACGGTTTCTTCAC 33271 || |||||| |||||| | || || || || ||||| ||| ||| | || Sbjct 412542 AAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCT-TCTCCACGATAGCTGGGT 412600 Query 33272 TCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGT 33331 | ||| | || || |||| ||| || || || || ||||| ||| |||| Sbjct 412601 TTGGTCTGTTGTTCAAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGT 412660 Query 33332 CTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 33391 |||| | ||| | ||||||||| ||||| || || ||||| | || | ||| || | || Sbjct 412661 CTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACC 412720 Query 33392 AAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAA 33451 | || || || || || || ||||| ||||| || ||||| || ||||||||||| | | Sbjct 412721 AGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCA 412780 Query 33452 GTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCT 33508 ||| || || | ||| ||| | | ||||| | ||||| |||||||||| Sbjct 412781 ATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCT 412840 Query 33509 TTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 33568 | || | ||||| || |||| || || || || | | ||| || ||| |||| Sbjct 412841 TCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTT 412900 Query 33569 TAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCT 33628 | | || | |||||||| | | || ||||||| || |||||||| || |||| Sbjct 412901 TGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCT 412960 Query 33629 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCA 33688 | ||||||||||||||| | ||||| | ||||| || || | | |||| ||| ||| Sbjct 412961 GGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCA 413020 Query 33689 AATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 33748 | || ||||| || |||||||| || ||||| || ||||| || || || Sbjct 413021 AGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAAGA 413080 Query 33749 ATTTTTCGTCTGGTGTTAGT-------TTATTCCAATCATTGATATCTTTAGATATATCT 33801 || | |||| ||| ||| || ||||| || ||||| ||||| || | || Sbjct 413081 ATCTCTCGT----TGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGTCA 413136 Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAA 33861 | ||||||| | ||||| || ||||| || |||||||| ||||| | ||| || || | Sbjct 413137 ATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTCGTTG 413196 Query 33862 TATTGGATTGGGAAAATAACAAA 33884 || | ||| ||||| | ||||| Sbjct 413197 TACTTGATAGGGAACAACACAAA 413219 >seq28 Length=63775 Score = 111 bits (122), Expect = 2e-19 Identities = 176/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256 ||||| ||||| || ||||| || ||||| || | ||| || ||||| | || | || Sbjct 54197 CCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAAGAA 54256 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 | ||||| | ||| ||| || || ||||||| ||| || || | |||| Sbjct 54257 CAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCAT 54316 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 || || ||||| || || | ||| || || | | || || |||||||||||||| Sbjct 54317 GATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCC 54376 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCGTTTG 63435 |||||| | ||||| || |||||||| | ||| |||||||||||| |||| ||||||| Sbjct 54377 CTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAACATTGGAACTAAT-CCGTTTG 54435 Query 63436 ATATACCATT 63445 | | ||||| Sbjct 54436 AGGTGCCATT 54445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946787297480