Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 4e-20
seq14 95.1 1e-14
>seq1
Length=1779567
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || || || || || | |||||| | || ||||| ||
Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | || || ||||| ||||| ||||| || || || || ||
Sbjct 999538 GACACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAG 999597
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||| | | ||| |||||| | || || | ||||| | | ||| || |||
Sbjct 999598 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACAAC 999657
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| |||||||| | || || ||||| ||||||||||| ||
Sbjct 999658 ATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGG 999704
>seq14
Length=288459
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | ||||| ||| |
Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | || ||| || ||| ||||| ||||| || ||||| || ||
Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 84498
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||| | || || |||||| | ||||| | ||||| | ||| || |||
Sbjct 84497 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84438
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||| || || || | || || ||||| ||||||||||| ||
Sbjct 84437 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84391
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045
||| ||||||| | ||||| ||||| || || || || | || || | ||||| ||
Sbjct 85078 ACATAATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAAT 85019
Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105
| |||||| ||||| | || || ||||| || || || || || ||||| |
Sbjct 85018 CTTCCGACACTATCGACAACGTTAAGTCCAAGATCCAAGATAAGGAGGGAATTCCTCCTG 84959
Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165
| || || ||| |||||| | || |||||| | ||||| | |||| | | ||| |
Sbjct 84958 ACCAGCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACT 84899
Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| ||||| ||||| || || || | || || ||||| ||||||||||| ||
Sbjct 84898 ACAACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84847
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || || || || || | || || | ||||| || | |
Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | || || ||||| ||||| || || || || || || ||
Sbjct 84101 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84042
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| ||| |||| | || || |||||| | ||||||| ||||| | ||| || |||
Sbjct 84041 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 83982
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||||| || ||||| || | || || ||||| ||||||||||| |||
Sbjct 83981 ATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGA 83934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935722288215
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |