Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq14 93.3 4e-14
>seq14
Length=288459
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || ||| || || | || ||||||||||| |||||||| ||| |
Sbjct 84391 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84450
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | ||| || | ||||| || ||| |||| || | |||||||| |||||
Sbjct 84451 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGA 84510
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||| ||||| ||| ||| | || | | | || | || || | ||||| |
Sbjct 84511 ATTCCTTCCTTGTC-TTGAATTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAAC 84569
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| |||||||| | ||| || ||||| || |||||
Sbjct 84570 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || ||| || || | || ||||||||||| |||||||| ||| |
Sbjct 84163 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84222
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | ||| || | ||||| || ||| |||| || | |||||||| || ||
Sbjct 84223 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 84282
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||| | | || | ||| |||| || || |
Sbjct 84283 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACT 84342
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| |||||||| | ||| || ||||| || |||||
Sbjct 84343 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || || || || | ||| || ||||| ||||||||||| || |
Sbjct 84619 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGAC 84678
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| | ||| || | ||||| || ||| |||| || | |||||||| || |||
Sbjct 84679 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 84738
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||| | | || | || |||| || || |
Sbjct 84739 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACT 84798
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| ||||| || | ||| || |||||||| |||||
Sbjct 84799 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | ||| | || ||| || || | || || ||||| ||||||||||| ||| |
Sbjct 83935 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCGGAC 83994
Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || | || | || || | ||||| || ||| |||| || | |||||||| || ||
Sbjct 83995 AAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 84053
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||||| || ||||| ||| || ||| | | || | ||| |||| || || |
Sbjct 84054 AATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAAC 84113
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| |||||||| | ||| || ||||| || |||||
Sbjct 84114 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012487291520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |