Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq13 280 2e-70 seq10 251 9e-62 seq28 105 8e-18 >seq13 Length=360411 Score = 280 bits (310), Expect = 2e-70 Identities = 1152/1810 (64%), Gaps = 31/1810 (2%) Strand=Plus/Minus Query 61889 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 61948 |||||||| ||||| || | || ||||||||||||| ||||| || | || Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 61949 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 62008 | | || ||| || ||||| |||| || || ||||| || || || | Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCT 46457 Query 62009 CTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACT 62068 ||||| |||||||| | || || ||| || | |||||||| | |||||||| | Sbjct 46456 CTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAA 46397 Query 62069 CGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATC 62125 ||||| || || ||||| | |||| | |||||||||||| | || || || Sbjct 46396 CGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATG 46337 Query 62126 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA--AACTC--TAAGGAGATG 62181 | ||||| || | |||||||| | | || || || || || | | | || Sbjct 46336 TTGTTCTTCATATTGTCATTCCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTG 46281 Query 62182 CGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATA 62241 || ||||| | || || || || | | ||||| | | |||||| || || || Sbjct 46280 TGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTA 46221 Query 62242 CGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62301 ||||| | | || || || ||||| ||||||| ||| || || || ||||| || || Sbjct 46220 AGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGC 46161 Query 62302 CACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATT 62361 || | ||| |||||| ||||||| | | | || | || | || ||||| | Sbjct 46160 AACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATCCCAGTC 46101 Query 62362 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG-AATACCGTTACTGGCGT 62420 ||| | || || || || | ||| || || | | Sbjct 46100 CCACAACTCGGATGGCTTTCTGTCCCACAAGTCGTACTGCAACAATCCCTTTGACGCAGG 46041 Query 62421 ACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA 62480 | || ||| ||||||| || ||||| ||||||| || ||| || || | || || | Sbjct 46040 A-GAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGATGCTTCCA 45982 Query 62481 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTAT 62540 ||| | | ||||||||| ||||| |||| | || | |||| |||||| || | Sbjct 45981 CAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCCTGGGAGT 45922 Query 62541 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 62600 | || || | | ||| || || || || || | |||||||| |||| | | |||| Sbjct 45921 CGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAG 45862 Query 62601 GTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 62660 |||| | |||| |||| || || ||||| || ||| ||| |||| | || || | Sbjct 45861 GTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGA 45802 Query 62661 TTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC----- 62715 || | || | ||||| || || ||| ||| || | || || ||| | Sbjct 45801 TTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTACC 45742 Query 62716 ---AAATCGCC-CATCTATTACAAACA-TGTT--CAATGCAACAGATGCCAGATTACAAA 62768 || | | ||||| | ||| | || ||| |||| || |||| ||||| | Sbjct 45741 AGGAACTAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGA 45682 Query 62769 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 62828 | || || || | | | || | | |||||| || | ||| | |||| Sbjct 45681 CAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGATGATTTGA 45622 Query 62829 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 62888 | | || || || | ||| ||| | || |||||||| |||||||| || | ||||||| Sbjct 45621 TAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATG 45562 Query 62889 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 62948 |||| || || ||| | || | ||| | || | | ||| | | ||||||| | Sbjct 45561 GAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGACGG 45502 Query 62949 TAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCC 63008 | ||| | | |||||| || || | ||||| ||| ||||| || || Sbjct 45501 TGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGT 45442 Query 63009 AAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 63068 | |||| ||| |||||| ||||| ||| | | ||| | ||| || |||| | | Sbjct 45441 AGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTT 45382 Query 63069 TCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTAT 63128 |||| ||||| || | ||| || ||||||||||| || | |||||||| |||| Sbjct 45381 CAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAA 45322 Query 63129 GTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 63188 ||| || || || |||||| ||| |||| ||| | | ||| |||| |||||| | Sbjct 45321 TTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAG 45262 Query 63189 GTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63248 | |||||||| || || | | | || |||| ||||| || || || || | || | | Sbjct 45261 GCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTG 45202 Query 63249 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTG 63308 | ||||| || |||| | || ||||||||| ||||| || || ||||| || || |||| Sbjct 45201 CTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTG 45142 Query 63309 AGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTT 63368 || || ||| | | || || || | ||| || || || || | | Sbjct 45141 CAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCT 45082 Query 63369 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 63428 | || ||||| |||||| ||||| || || || || || || || |||||| ||| Sbjct 45081 TGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCA 45022 Query 63429 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 63488 || || || ||||| ||||||||| | | || || ||||| || ||||| | Sbjct 45021 TGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTG 44962 Query 63489 GAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 63548 ||||| |||||||||| || | | || | | |||||| || || || | || | Sbjct 44961 GAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAA 44902 Query 63549 TATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63606 | | |||| ||||| || || || || | ||| | || ||||| ||||||||| | Sbjct 44901 TGT--CATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTTCAGC 44844 Query 63607 GATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 63666 | ||| ||| | | | | |||||| ||| |||||||||| || ||||| || ||||| Sbjct 44843 AACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGTAGTT 44784 Query 63667 GTA--TGAAA 63674 ||| ||||| Sbjct 44783 GTAGTTGAAA 44774 >seq10 Length=432243 Score = 251 bits (278), Expect = 9e-62 Identities = 563/838 (67%), Gaps = 22/838 (3%) Strand=Plus/Plus Query 32391 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTG 32450 || |||||||| || || || ||| | || || || || ||||| || |||||||| ||| Sbjct 412363 TTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTG 412422 Query 32451 GTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 32510 || ||||| |||| || || ||||| | || ||||||||| || || || || Sbjct 412423 GTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGCAATCTATCGGCAACGAACTCG 412482 Query 32511 ATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAACTGGAAGAGCCACAGT 32569 | ||| ||||| ||||| |||||||| | ||| || |||| | || | || Sbjct 412483 ACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAGCTTG-CTGGCAAGGCATCGGT 412541 Query 32570 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT-ACTGTTTCTTCAC 32628 || |||||| |||||||| ||| || || || ||||| ||| || | || Sbjct 412542 AAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATCT-TCTCCACGATAGCTGGGT 412600 Query 32629 TCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGT 32688 | ||| | || || |||| ||| || || || || ||| | ||| |||| Sbjct 412601 TTGGTCTGTTGTTCAAGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGT 412660 Query 32689 CTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 32748 |||| | ||| ||||||||||| ||||| || || ||||| | || | ||| || | || Sbjct 412661 CTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACC 412720 Query 32749 AAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAA 32808 | || || || ||||| || ||||| |||||||| ||||| || || |||||||| | | Sbjct 412721 AGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCA 412780 Query 32809 GTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCT 32865 ||| || || | ||| ||| | | ||||| | ||||| |||||||||| Sbjct 412781 ATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCT 412840 Query 32866 TTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTT 32925 | || | ||||| || | || ||||| || || | | ||| || ||| |||| Sbjct 412841 TCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTT 412900 Query 32926 TAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTT 32985 | | || | || ||||| | | || ||||||| || |||||||| || || | Sbjct 412901 TGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCT 412960 Query 32986 GAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT--GC 33043 | ||||||||||| ||| | ||||| | ||||| || || | | |||| ||||| | Sbjct 412961 GGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAA--GTTCTCCAC 413018 Query 33044 TAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAA 33103 || || ||||| || |||||||| || ||||| || ||||| || || || Sbjct 413019 CAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAA 413078 Query 33104 ATATTTTTCGTCTGGTGTTAGT-------TTATTCCAATCATTGATATCTTTAGATATAT 33156 || | |||| ||| ||| || ||||| || ||||| ||||| || | | Sbjct 413079 GAATCTCTCGT----TGTCAGTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGT 413134 Query 33157 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 33214 | | ||||||| | ||||| || ||||| || |||||||| ||||| | ||| || || Sbjct 413135 CAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTC 413192 >seq28 Length=63775 Score = 105 bits (116), Expect = 8e-18 Identities = 175/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63111 ||||| ||||| || ||||| || ||||| || | ||| || ||||| | || | || Sbjct 54197 CCACTTTCCGTTATTTTTCACCCGCTTCATGAATAAATCTGGGATCCACAAGGCAAAGAA 54256 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 | ||||| | ||| ||| || || ||||||| ||| || || | |||| Sbjct 54257 CAAGTCTCTCGCTCTCAATTCATCAGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCAT 54316 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 || || ||||| || || | ||| || || | | || || |||||||||||||| Sbjct 54317 GATGTCCCCGTGCCAAGGCTCGATGTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCC 54376 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA-TAATACCATTGG 63290 |||||| | ||||| || |||||||| | ||| |||||||||||| |||| || || | Sbjct 54377 CTGATCGACATATCTTGCAGTGTTATTGAAGACTTTCAACATTGGAACTAAT-CCGTTTG 54435 Query 63291 ATGTACCATT 63300 | || ||||| Sbjct 54436 AGGTGCCATT 54445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631580218800