Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq14 143 2e-29
seq1 120 3e-22
>seq14
Length=288459
Score = 143 bits (158), Expect = 2e-29
Identities = 174/235 (74%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||||||||| ||||||| | ||||| || |||||
Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| || || ||| || ||| ||||| || || |||||||||||||
Sbjct 84101 GACACTATCGA--CAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACC 84044
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | | || || || || || ||||| ||||||| | ||| || ||| ||||
Sbjct 84043 AGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACA 83984
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231
| ||||| || |||||||| | || || ||| | || | ||||| ||||| ||
Sbjct 83983 ACATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGAAACTA 83929
Score = 129 bits (142), Expect = 5e-25
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||||||||| ||||||| | ||||| || |||||
Sbjct 84389 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84330
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||||||||| || || ||| || ||| ||||| || || |||||||||||||
Sbjct 84329 GACACTATCGA--CAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACC 84272
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | | || || || || || ||||| ||||| | | ||| || ||| ||||
Sbjct 84271 AGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACA 84212
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| || ||||| | || || ||| | || | ||||| ||
Sbjct 84211 ACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84163
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||||||||| ||||||| | ||||| ||||| |||
Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558
Query 25059 GACACTATCGA-GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | | || | |||| ||| ||||| ||||| ||||| || |||||
Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCA-AGACAAGGAAGGAATTCCTCCAGACCA 84499
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| | | || || || || || ||||| ||||| | | ||| || ||| |||||
Sbjct 84498 GCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAA 84439
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| || ||||| | || || ||| | || | ||||| ||
Sbjct 84438 CATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84391
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| || || |||||||| || |||||||| | ||||| || || ||
Sbjct 85074 AATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAATCTTC 85015
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| | ||| || ||| || || || || ||||| ||||||||
Sbjct 85014 CGACACTATCGACAACGTTAAGTCCAAGATCCAAGATAAGGAGGGAATTCCTCCTGACCA 84955
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|| | | |||||||| || || ||||| ||||| | | | || || ||| |||||
Sbjct 84954 GCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAA 84895
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| || ||||| | || || ||| | || | ||||| ||
Sbjct 84894 CATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84847
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| ||||| ||||||| | ||||| || || ||
Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| || || || || ||| || ||| ||||| || || || ||||||||||
Sbjct 84785 GACACAATTGA--CAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACC 84728
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | | || || || || || ||||| ||||| | | | || || || ||||
Sbjct 84727 AGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACA 84668
Query 25177 ATATTCAAAAAGAATCCAC 25195
| ||||| || ||||| ||
Sbjct 84667 ACATTCAGAAGGAATCTAC 84649
>seq1
Length=1779567
Score = 120 bits (132), Expect = 3e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| ||||| |||| || | || || || || |||
Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| ||||| ||||| |||||||||||||
Sbjct 999538 GACACCATCGA--CAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACC 999595
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | | || |||||||| || ||||| || || | | || || ||| ||||
Sbjct 999596 AGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACA 999655
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| ||||| || | || || ||| | || | ||||| ||
Sbjct 999656 ACATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGG 999704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327720097195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |