Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 255 7e-63 >seq10 Length=432243 Score = 255 bits (282), Expect = 7e-63 Identities = 612/904 (68%), Gaps = 25/904 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| |||||| || ||||| ||| |||| | || || || || || ||||||||| | Sbjct 412329 CATGACACCAGCCTTCTGGTAGTCCGAAACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGC 412388 Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAA---TACTTTTCACC 92904 ||| || || | || | || || ||| || || | || ||| | ||| | ||| Sbjct 412389 CAAGGAAATGTTCTCCATAAAGTCGAATGGGTTGGTGACATTGTAAACCTTCTTGTTACC 412448 Query 92905 GATCAACTCGTACAAT-AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 ||| | |||| |||||||| || || || || | ||| || ||||||| |||| Sbjct 412449 ---CAAGGCC-ACAAGCAATCTATCGGCAACGAACTCGACGTATTGGCACATCAAGTCAC 412504 Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023 | |||||||| | | | | | || | || ||||| ||| | ||||| || || | Sbjct 412505 AGTTCATTCCCAACAAGCTTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATAGTGA 412564 Query 93024 CGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTT-TTGTACGACATAA 93079 |||| || | | || || | | | | || ||| |||| | |||| | | | | Sbjct 412565 CGGCCTCAGTAATAAT--CTTCTCCACGA-TAGCTGGGTTTGGTCTGTTGTTCAAG-TGA 412620 Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 | ||| ||||| |||||||| || || ||||||||||||| | ||||| || ||| Sbjct 412621 GAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTG 412680 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| || | ||| || | || |||| ||||| | ||| || || || ||||| Sbjct 412681 GAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAG 412740 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 ||||| || || |||||||| || || ||||| ||||| | | ||||||||| || Sbjct 412741 CCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCC 412800 Query 93260 GAAT-TACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318 | |||| ||||||| | || ||||| ||||| || |||||||| ||||| | | Sbjct 412801 TCGTCGTCTGC-GATCCATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATGTT 412859 Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 |||||||||||| || | | || ||| | | ||| ||||| | ||||| || Sbjct 412860 TTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGATCAA 412919 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438 || ||| || |||| || |||| || ||||| || |||||||||||||||||| | Sbjct 412920 CAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTT 412979 Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 || || | |||||| || || |||||| |||| || | || |||||||| || || Sbjct 412980 GGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCC 413039 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATA-TAT-GCTTTATAAAATGTTTC-TCATCA-TCTT 93554 || || || ||||| |||||||| | | | | | | ||| | || | ||| || | Sbjct 413040 GTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAAGAATCTCTCGTTGTCAGTCAT 413099 Query 93555 TAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACG 93614 | | || | ||| ||| | ||||| || | || | |||||| ||||||| || | Sbjct 413100 TCTG-TTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAG 413158 Query 93615 ATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAA 93674 ||||||| || ||||||||||| | ||| || || | || | || || || | |||| Sbjct 413159 ATGCTTCGGCCTTTTTGTACATTTGCCAAATCTCGTTGTACTTGATAGGGAACAACACAA 413218 Query 93675 AACG 93678 |||| Sbjct 413219 AACG 413222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860431079720