Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq10 255 7e-63
>seq10
Length=432243
Score = 255 bits (282), Expect = 7e-63
Identities = 612/904 (68%), Gaps = 25/904 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| |||||| || ||||| ||| |||| | || || || || || ||||||||| |
Sbjct 412329 CATGACACCAGCCTTCTGGTAGTCCGAAACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGC 412388
Query 92850 CAAAGATATCGAATTCACTA-GT-GATTGGATTCTTGGCGTTATAA---TACTTTTCACC 92904
||| || || | || | || || ||| || || | || ||| | ||| | |||
Sbjct 412389 CAAGGAAATGTTCTCCATAAAGTCGAATGGGTTGGTGACATTGTAAACCTTCTTGTTACC 412448
Query 92905 GATCAACTCGTACAAT-AATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
||| | |||| |||||||| || || || || | ||| || ||||||| ||||
Sbjct 412449 ---CAAGGCC-ACAAGCAATCTATCGGCAACGAACTCGACGTATTGGCACATCAAGTCAC 412504
Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023
| |||||||| | | | | | || | || ||||| ||| | ||||| || || |
Sbjct 412505 AGTTCATTCCCAACAAGCTTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATAGTGA 412564
Query 93024 CGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTT-TTGTACGACATAA 93079
|||| || | | || || | | | | || ||| |||| | |||| | | | |
Sbjct 412565 CGGCCTCAGTAATAAT--CTTCTCCACGA-TAGCTGGGTTTGGTCTGTTGTTCAAG-TGA 412620
Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| ||| ||||| |||||||| || || ||||||||||||| | ||||| || |||
Sbjct 412621 GAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTG 412680
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||| || | ||| || | || |||| ||||| | ||| || || || |||||
Sbjct 412681 GAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAG 412740
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259
||||| || || |||||||| || || ||||| ||||| | | ||||||||| ||
Sbjct 412741 CCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCC 412800
Query 93260 GAAT-TACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
| |||| ||||||| | || ||||| ||||| || |||||||| ||||| | |
Sbjct 412801 TCGTCGTCTGC-GATCCATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATGTT 412859
Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
|||||||||||| || | | || ||| | | ||| ||||| | ||||| ||
Sbjct 412860 TTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGATCAA 412919
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
|| ||| || |||| || |||| || ||||| || |||||||||||||||||| |
Sbjct 412920 CAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTT 412979
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|| || | |||||| || || |||||| |||| || | || |||||||| || ||
Sbjct 412980 GGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCC 413039
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATA-TAT-GCTTTATAAAATGTTTC-TCATCA-TCTT 93554
|| || || ||||| |||||||| | | | | | | ||| | || | ||| || |
Sbjct 413040 GTCCGAAGCAGCAAAGAAAGCCAACACTCTGGAGATGAAGAATCTCTCGTTGTCAGTCAT 413099
Query 93555 TAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACG 93614
| | || | ||| ||| | ||||| || | || | |||||| ||||||| || |
Sbjct 413100 TCTG-TTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAG 413158
Query 93615 ATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAA 93674
||||||| || ||||||||||| | ||| || || | || | || || || | ||||
Sbjct 413159 ATGCTTCGGCCTTTTTGTACATTTGCCAAATCTCGTTGTACTTGATAGGGAACAACACAA 413218
Query 93675 AACG 93678
||||
Sbjct 413219 AACG 413222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860431079720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |