Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
seq14 131 1e-25
seq13 91.5 1e-13
seq10 86.0 5e-12
>seq1
Length=1779567
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| |||||||| ||||| || ||||| || | || | || || ||| || |
Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || || ||||||||||| ||||||||||| || ||
Sbjct 999538 GACACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAG 999597
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || |||||||| || || || ||||| | | ||| | ||||| ||||||
Sbjct 999598 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACAAC 999657
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| ||| | || || || ||| ||||| | || |||
Sbjct 999658 ATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGGT 999705
>seq14
Length=288459
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| ||||| |||||||| || ||||| | ||||| ||| | ||
Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || || |||||||||||||| |||||||| || ||
Sbjct 84101 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84042
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || || || || ||| | | || | ||||| ||||||
Sbjct 84041 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 83982
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || |||||||| | || || || ||| ||||| | || ||
Sbjct 83981 ATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 83935
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| ||||| |||||||| || ||||| | ||||| ||| | ||
Sbjct 84389 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84330
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || || |||||||||||||| |||||||| || ||
Sbjct 84329 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84270
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || || || || || | | || | ||||| ||||||
Sbjct 84269 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84210
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || ||||| | || || || ||| ||||| | || |||
Sbjct 84209 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 84162
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| ||||| ||||| || ||||| || ||||| | ||||| ||| | ||
Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || || |||||||||||||| || ||||| || ||
Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || || || || || | ||| | || || ||||||
Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || ||||| ||| | || || |||||| ||||| | || |||
Sbjct 84665 ATTCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGT 84618
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| ||||| |||||||| || ||||| | ||||| || | |
Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | ||| ||||||||||||||||| || ||||| || || ||
Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 84498
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || || || || || || || || || | | || | ||||| ||||||
Sbjct 84497 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84438
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || ||||| | || || || ||| ||||| | || |||
Sbjct 84437 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 84390
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||||||||| || ||||| || || |||| | ||||| ||| | ||
Sbjct 85073 ATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAATCTTCC 85014
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || || ||||| |||||||| ||||| || || ||
Sbjct 85013 GACACTATCGACAACGTTAAGTCCAAGATCCAAGATAAGGAGGGAATTCCTCCTGACCAG 84954
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| || || || || || || | ||| | ||||| ||||||
Sbjct 84953 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAAC 84894
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || ||||| | || || || ||| ||||| | || |||
Sbjct 84893 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 84846
>seq13
Length=360411
Score = 91.5 bits (100), Expect = 1e-13
Identities = 530/831 (64%), Gaps = 43/831 (5%)
Strand=Plus/Minus
Query 129415 GCTTCCAATGCGCCAAAATAAATTGTTTCGGCAATTTTGGTGTTCAACACTTTGGCCTGG 129474
||||||| || || |||||| || ||| || | |||||||| |||| || |
Sbjct 45988 GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCC 45929
Query 129475 TCGCTTTCGTACGGCATACGCAA---CATGGCAAATGTGTCGGCCAAACCTTGAATACCC 129531
| | ||| | |||| | ||| |||| |||| || || | |||||||| ||
Sbjct 45928 TGGGAGTCGAAAGGCAATCTCAAGGACATG---AATGCATCAGCAAGACCTTGAACTCCA 45872
Query 129532 ACACCGATGGGTCGATGTTT-TC-TATTGGATTTTTGTGC--CGACAACAAGGGATAGTA 129587
| | | || |||| ||||| || |||||||| || || | ||||| || | | |
Sbjct 45871 AGAGCAATAGGTC--TGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAA--A 45816
Query 129588 GTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACAT 129647
|| |||| || ||| |||| || || | |||| || || || | | ||| |
Sbjct 45815 ATTTCTGTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTT 45756
Query 129648 TTCAAAATTGTACTCGC--CTA----CATCGATGTCGACAAATTGATTGACACAAATCGA 129701
||||| |||||| | ||| |||| | || || ||| | | | ||| ||
Sbjct 45755 ATCAAAGTTGTACCAGGAACTAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGA 45696
Query 129702 GGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAA 129761
|||||| || ||||| ||| ||| | | | | |||||||||||| || |||||
Sbjct 45695 GGCCAAGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAA 45636
Query 129762 ATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTT 129821
||| ||| || | ||||| | |||||| ||| ||||| |||| |||||||| ||
Sbjct 45635 GTTAGATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTT 45576
Query 129822 GTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC--AAG 129879
||||| |||| | || || || || || ||||| ||| ||| | | | || |||
Sbjct 45575 GTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTC--CAA-GATAGAGTACCAAAG 45519
Query 129880 -TCTCGAGCCTTGA---TCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATACAG 129935
| | ||||||||| | |||| || ||| | |||| || | ||||
Sbjct 45518 CTTTTGAGCCTTGACGGTGGATCTTCCA---CGGCCTTCTCTCTCATACTTTTCGTACAA 45462
Query 129936 TTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGC--AAC--GGCGATTCACGCGGACACA 129991
|||||| || ||||| || || ||| ||| || | |||| ||| | |
Sbjct 45461 AGCTTCAAACTCATCGCCGTAGAC---ATC-AGCCAAACCAGGAGCTTCATTTGGAGAAA 45406
Query 129992 TCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGG 130051
|||| |||| || | ||| |||| ||||| |||||||| || | ||| || |
Sbjct 45405 ACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAG 45346
Query 130052 CGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGA 130111
| |||||||||| ||| | | || || ||| ||| | | | || | ||
Sbjct 45345 CAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGA 45286
Query 130112 AATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC---CTTCCGTT 130168
| ||| ||||||| || ||||| || || | ||||| || | ||||| | || |
Sbjct 45285 AGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGT 45226
Query 130169 TGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTG 130219
|||| |||||||| || | || | | |||||| | || |||| |||||
Sbjct 45225 TGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTG 45175
>seq10
Length=432243
Score = 86.0 bits (94), Expect = 5e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 117080 TGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATCAAGACCAAAGG 117139
||||||||| |||||||| || ||| ||||| | || || | | |||| | |||
Sbjct 412764 TGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGG 412705
Query 117140 TCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAAGGTTTACACAC 117199
| | ||||| ||||| ||||| ||||||||| || | | ||||||||||| |||||
Sbjct 412704 TTTGATGCCTGGTCTTACGTTCTCCAACGAATTGATTTGCAGAGACGAAGGTTTGCACAC 412645
Query 117200 CGATTTTGCGTGCATGT 117216
|| ||||| ||| |||
Sbjct 412644 TGACTTTGCCTGCTTGT 412628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727728881945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |