Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq14 168 1e-36 seq1 159 6e-34 >seq14 Length=288459 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | |||||||| ||||||||||| || ||||| | || || || || Sbjct 84177 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTC 84236 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || ||||| || | |||||| ||||| |||||||| || |||||||| Sbjct 84237 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTC 84296 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| || ||||| ||||| | ||||| ||||| || |||||||| Sbjct 84297 TTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGT 84356 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 84357 CTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389 Score = 167 bits (184), Expect = 4e-36 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | |||||||| ||||||||||| || ||||| | || || || || Sbjct 84861 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTC 84920 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||| ||||| || ||||| || ||||| || Sbjct 84921 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTATC 84980 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| ||| ||||| ||||| | ||||| |||||||| |||||||| Sbjct 84981 TTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATGGT 85040 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | ||| || || || || ||||||||| Sbjct 85041 CTTGCCGGTCAAGGTTTTAACAAAGATTTGCATTATG 85077 Score = 165 bits (182), Expect = 2e-35 Identities = 178/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 68226 TTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA 68285 ||||| ||||| || | | | ||| |||||||| | ||||| || || || ||||| Sbjct 83926 TTTTAGTTTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTG 83985 Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || ||||| | || || |||||||| || ||||| || ||||| || | |||||| ||| Sbjct 83986 TAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGG 84045 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || |||||||| || ||||||||||| ||||| | ||| || ||||| ||||| | Sbjct 84046 TCAGGTGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGAC 84105 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || |||||||| || || || | ||||| ||||| || ||||| Sbjct 84106 GATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | |||||||| ||||||||||| || ||||| | || || || || Sbjct 84405 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTC 84464 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || ||||| || | |||||| ||||| || ||||| ||||||||||| Sbjct 84465 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTC 84524 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 |||||| || | || ||| || |||||||| | || || ||||| || |||||||| Sbjct 84525 TTGAATTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGATGGT 84584 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 84585 CTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617 Score = 136 bits (150), Expect = 7e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || || || || || ||||| || || || | || || || || Sbjct 84633 CAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 84692 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || ||||| || | |||||| ||||| ||||| || || |||||||| Sbjct 84693 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTC 84752 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| || || || ||||| | ||||| ||||| || |||||||| Sbjct 84753 TTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACTTCTAAAGTGATGGT 84812 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| || ||||| Sbjct 84813 CTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845 >seq1 Length=1779567 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || || || ||||||||||| || ||||| | || || || || Sbjct 999690 CAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 999631 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || || ||||| ||||| || || | |||||| ||||| |||||||| ||||||||||| Sbjct 999630 CTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTC 999571 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||| || ||||||||||| | ||||| || |||||||| ||||| Sbjct 999570 TTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGT 999511 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| || || || ||||| Sbjct 999510 CTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621789425160