Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq14 168 1e-36
seq1 159 6e-34
>seq14
Length=288459
Score = 168 bits (186), Expect = 1e-36
Identities = 165/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | |||||||| ||||||||||| || ||||| | || || || ||
Sbjct 84177 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTC 84236
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || ||||| || | |||||| ||||| |||||||| || ||||||||
Sbjct 84237 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTC 84296
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||| || ||||| ||||| | ||||| ||||| || ||||||||
Sbjct 84297 TTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGT 84356
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||| ||||| || |||||
Sbjct 84357 CTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
Score = 167 bits (184), Expect = 4e-36
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | |||||||| ||||||||||| || ||||| | || || || ||
Sbjct 84861 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCGTC 84920
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||| ||||| || ||||| || ||||| ||
Sbjct 84921 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTATC 84980
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||| ||| ||||| ||||| | ||||| |||||||| ||||||||
Sbjct 84981 TTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGATGGT 85040
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| || || | ||| || || || || |||||||||
Sbjct 85041 CTTGCCGGTCAAGGTTTTAACAAAGATTTGCATTATG 85077
Score = 165 bits (182), Expect = 2e-35
Identities = 178/236 (75%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 68226 TTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA 68285
||||| ||||| || | | | ||| |||||||| | ||||| || || || |||||
Sbjct 83926 TTTTAGTTTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTG 83985
Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345
|| ||||| | || || |||||||| || ||||| || ||||| || | |||||| |||
Sbjct 83986 TAGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGG 84045
Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405
|| |||||||| || ||||||||||| ||||| | ||| || ||||| ||||| |
Sbjct 84046 TCAGGTGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGAC 84105
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || |||||||| || || || | ||||| ||||| || |||||
Sbjct 84106 GATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161
Score = 163 bits (180), Expect = 5e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | |||||||| ||||||||||| || ||||| | || || || ||
Sbjct 84405 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTC 84464
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || ||||| || | |||||| ||||| || ||||| |||||||||||
Sbjct 84465 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTC 84524
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|||||| || | || ||| || |||||||| | || || ||||| || ||||||||
Sbjct 84525 TTGAATTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGATGGT 84584
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||| ||||| || |||||
Sbjct 84585 CTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617
Score = 136 bits (150), Expect = 7e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | || || || || || ||||| || || || | || || || ||
Sbjct 84633 CAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGACAAGGTTCTACCGTC 84692
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || ||||| || | |||||| ||||| ||||| || || ||||||||
Sbjct 84693 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATTCCCTCCTTGTC 84752
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||| || || || ||||| | ||||| ||||| || ||||||||
Sbjct 84753 TTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACTTCTAAAGTGATGGT 84812
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||| ||||| || |||||
Sbjct 84813 CTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845
>seq1
Length=1779567
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | || || || ||||||||||| || ||||| | || || || ||
Sbjct 999690 CAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 999631
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|| || ||||| ||||| || || | |||||| ||||| |||||||| |||||||||||
Sbjct 999630 CTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTC 999571
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||| || ||||||||||| | ||||| || |||||||| |||||
Sbjct 999570 TTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGT 999511
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||| || || || |||||
Sbjct 999510 CTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621789425160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |