Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq10 196 9e-45 >seq10 Length=432243 Score = 196 bits (216), Expect = 9e-45 Identities = 575/871 (66%), Gaps = 20/871 (2%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || || | || || ||| |||||||| ||||| | || |||||| || Sbjct 413204 ATCAAGTACAACGAGATTTGGCAAATGTACAAAAAGGCCGAAGCATCTTTCTGGACTGCG 413145 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTC---ACTGTCTGAGAACGAA 42401 || || |||||| || | || |||| || |||| || | || |||| ||||| Sbjct 413144 GAAGAAATTGACTTGTCGAAAGACATCAACGACTGGAAGAACAGAATGACTGACAACGAG 413085 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 | || ||| || | | |||| ||||| || || || ||||| || ||||||||| Sbjct 413084 AGATTCTTCATCTCCAGAGTGTTGGCTTTCTTTGCTGCTTCGGACGGAATTGTCAATGAG 413025 Query 42462 AACCTGGCC-ACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520 ||| ||| | | || || ||||| ||| | ||||| || |||||||| Sbjct 413024 AACTTGGTGGAGAACTTTTCTGCT-GAGGTCCAGATCCCAGAGGCCAAATGTTTCTACGG 412966 Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580 |||||||| || || ||| | ||||| || ||| | || || || | || Sbjct 412965 ATTCCAGATCATGATGGAAAACATCCACTCGGAAACCTACTCTTTGTTGATCGACTCCTA 412906 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCAT 42640 |||| || || ||| | || ||||||| || || || | || || ||||| Sbjct 412905 CATCAAAGACCCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGAAAACATCCCTTGCAT 412846 Query 42641 CAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCC-CGACGCAACGTTCGGCG 42699 ||||||||||| || ||||| | | ||||||| || | ||| || ||| | || Sbjct 412845 TAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGC-AGACGACGAGGCCTTGTTTGCCG 412787 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 | || |||| |||||| | || ||||| || || |||||||| ||| | || ||||| | Sbjct 412786 AAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGCCTCTA 412727 Query 42760 TCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||| | ||| ||| |||| | |||||| || || || ||||| |||||| | || Sbjct 412726 TCTTCTGGTTGAAGAAGAGAGGTTT-GATGCCTGGTCTTACGTTCTCCAACGAATTGATT 412668 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC---CACCTC 42875 |||| ||||| || |||| | |||||||||||| | ||||||| | || | Sbjct 412667 TGCAGAGACGAAGGTTTGCACACTGACTTTGCCTGCTTGTTGTTCTCTCACTTGAACAAC 412608 Query 42876 AGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAG 42935 || | ||| ||| | | | || | || || || |||||||| || || Sbjct 412607 AGAC-CAAACCC---AGCTATC--GTGGAGAAGATTATTACTGAGGCCGTCACTATTGAA 412554 Query 42936 AAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATG 42995 || || | | | || | | |||| | | || | || |||||| ||| | ||| Sbjct 412553 AAAGAATACTTTACCGATGCCTTGCCAGCAAGCTTGTTGGGAATGAACTGTGACTTGATG 412494 Query 42996 TGCAAGTACATCCAGTACGTCGCCGA-CCATCTCCTGTGCCAGATGGGTCTCAGCCGCCT 43054 ||| | ||| || ||| ||| ||||| || | |||| | ||||| || | Sbjct 412493 TGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTGTGGC-CTTGGGTAACAAGAAGGT 412435 Query 43055 CTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAA 43114 ||||| | ||| |||||||||||||||||||| || |||| || |||||||| Sbjct 412434 TTACAATGTCACCAACCCATTCGACTTTATGGAGAACATTTCCTTGGCAGGAAAGACCAA 412375 Query 43115 CTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||||| | || | ||||||||| Sbjct 412374 CTTTTTCGAGAAGAGAGTTTCGGACTACCAG 412344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338574375280