Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 3e-13 seq16 84.2 5e-11 >seq13 Length=360411 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 348362 GGAGTTCAAGGACTTCAGGATGTATTCTTCAAACTGAGATTTTCTTACGACTCACCGGAA 348421 ||||||||||| ||| |||| |||| | ||||||| ||| |||||| | |||| Sbjct 45873 GGAGTTCAAGGTCTTGCTGATGCATTCATGTCCTTGAGATTGCCTTTCGACTCCCAGGAA 45932 Query 348422 GCCAGGGACCTCAACCGCGAAATCTTCGAACATATTTACTATGCCGCTGTAGAAGCATCG 348481 || | || | ||| | || ||||| ||||| |||| ||||| |||||||| Sbjct 45933 GCTAAAGAGTTGAACATTCAGATATTCGAGACCATTTATCATGCTGCTGTGGAAGCATCT 45992 Query 348482 GTAGAACTCGCTGAGATCCATGGTCCTTATCCAACATTCGAAGGGTCTCCCGCGAGCAAA 348541 | || || ||| || | ||||| ||| |||| ||||| ||||| ||| |||| Sbjct 45993 ATCGAGCTTGCTCAGGAGGAAGGTCCATATGAGACATATGAAGGTTCTCCTGCG-TCAAA 46051 Query 348542 GGCATTCTT-CAGTACCACTTGTGGGA 348567 || ||| || |||||| |||||||||| Sbjct 46052 GGGATTGTTGCAGTACGACTTGTGGGA 46078 >seq16 Length=283865 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 325119 CTACGATGTCTTTAGGGTTGTAACTGGGAATGTTCGTCGACCATCCGGTTCCGATACCAC 325178 ||||||| || || ||| ||||||||||||||||||||||||| ||||||||||| | Sbjct 98478 CTACGATATCAGCCGGATTGAAACTGGGAATGTTCGTCGACCATCCTGTTCCGATACC-C 98536 Query 325179 TC-GATCCATTCACCAGGATACTCGGAATAACAGGCACATAATACTCTGGTTC 325230 || | ||||| |||| | | || || ||||||| ||| |||| ||||| Sbjct 98537 TCAGCACCATTTACCAAAAGCATTGGGATTACAGGCAAATACCACTCGGGTTC 98589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653598940934