Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq13 239 5e-58 >seq13 Length=360411 Score = 239 bits (264), Expect = 5e-58 Identities = 906/1407 (64%), Gaps = 41/1407 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || || |||| ||||| || |||||||| || ||||||||||||||||| | || ||| Sbjct 46237 TAAATGTTGGATGTGTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAG 46178 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTC--CCTAATGCGTT 114059 ||||| ||||| || || | || | || | |||||| | || || ||| || Sbjct 46177 GCTGTTGGCATCGGAGCAACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATT--TT 46120 Query 114060 CCTTGAGGGCGTCCCAGTCGTA-------GTTGAGCTTTGTCTCCCCCTGCCACATATCA 114112 ||| | | |||||||| | | || ||||| | |||| ||| || Sbjct 46119 GCTTCAAAGTATCCCAGTCCCACAACTCGGATG-GCTTTCTGTCCC------ACAAGTCG 46067 Query 114113 AACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACC 114172 |||| | | || | || || || || || ||| ||||||| ||||| || || || Sbjct 46066 TACTGCAACAATCCCTTTGACGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCC 46007 Query 114173 TCCGCCAATTCGG-AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGC 114231 | || | ||| || | || || | || || ||||| || ||||| || || || Sbjct 46006 TGAGCAAGCTCGATAGAT-GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAAT 45948 Query 114232 ATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGC 114291 |||| | || || || | ||| || || | | || | | || ||| |||| || Sbjct 45947 GTTCAACTCTTTAGCTTCCTGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGC 45888 Query 114292 GAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC 114351 |||||||| || || || |||| || | | ||||||||| || ||| || ||| Sbjct 45887 AAGACCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTC 45828 Query 114352 CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411 || || |||||||| || || || | || || | ||| | || |||||||| || | Sbjct 45827 AACAGGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCAC 45768 Query 114412 TTCATGAAGCTTTTCGTAATCAAAACTG---CGAGTCTCTTCATTGACATACTTAGGAAG 114468 || || | ||| || | | | | | | || | || || || || | |||| Sbjct 45767 CTCGTGCAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTTCTCA-ACGAATGAAG 45709 Query 114469 G----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 114524 | || || || |||| ||||| |||| || || || |||||| | || Sbjct 45708 GCAAAGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAA 45649 Query 114525 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 114584 | || |||||| || || || || | |||||||||||||| || | || ||| Sbjct 45648 TCTCACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGT 45589 Query 114585 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 114644 |||| ||||||||||| | |||| |||| || || ||||| ||||| | | | |||| Sbjct 45588 TACAAGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAG 45529 Query 114645 CCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 114703 | ||| | | | | | || | || |||| | | || || || ||| |||||| Sbjct 45528 AGTACCAAAGCTTTTGAGCCTTG-ACGGTGGATCTTCCACGGCCTTCTCTCTCATACTTT 45470 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 114763 ||| | ||||||||||| || || | | || | | || || || | || ||| Sbjct 45469 TCGTACAAAGCTTCAAACTCATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGA 45410 Query 114764 CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 | || | || ||| | ||| | ||||| | ||||||||| | || |||||||| Sbjct 45409 GAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAA 45350 Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 ||||| | ||| | ||| | | | |||||| | || || || | | || Sbjct 45349 AGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCG 45290 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT------TGACCCC 114937 | ||||| | || || || ||||| || |||| ||| | ||| | || || | Sbjct 45289 ATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTC 45230 Query 114938 TTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGA 114997 || | | ||| | |||| ||||| | |||||| || || || || | ||||||| Sbjct 45229 TT--GTTG-CCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGA 45173 Query 114998 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCA 115057 |||||||| | ||| || || || || ||| || | | ||||| | Sbjct 45172 ATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTG 45113 Query 115058 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117 |||||||||| ||||||||| || || | ||| || ||| ||||| | | | || Sbjct 45112 TGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTG 45053 Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177 |||| || |||||||| |||||| |||| | || | |||||| || ||||||||| Sbjct 45052 TCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGG 44993 Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGA 115236 || ||||| ||||| || ||||| | |||||| | |||| | || || || ||||| Sbjct 44992 GGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAG-TATCTCTGGGA 44934 Query 115237 CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 115296 |||| || ||| || || | || |||||| | |||||||||||| | || || Sbjct 44933 CATCAAATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAAC 44874 Query 115297 CCGCATAAACATGTATTGGGGTGTTTC 115323 | ||| | || | || ||| |||| Sbjct 44873 TCTCATGATCAAATGCTGTGGTCTTTC 44847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353204253240