Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq13 123 2e-23 >seq13 Length=360411 Score = 123 bits (136), Expect = 2e-23 Identities = 482/748 (64%), Gaps = 16/748 (2%) Strand=Plus/Plus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||| ||||||| || || ||||| || || ||||| || |||||||| | | Sbjct 44961 CCAACCTTGTTCAATGCAGGTACCCCAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCC 45020 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGAC-TGTGCGACCATCTC 94016 | |||| ||||||||| ||| |||| ||||| | | || ||| || || || || Sbjct 45021 ATGAAGGATGACTCCATCGACGGTATTTACGACA-CATTAAAGACATGCGCTTTAATTTC 45079 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || || || || || || | ||||| || | | | || | ||||| Sbjct 45080 CAAGAGTGCTGGTGGTATTGGTTTGCACATCCACAACATCAGAAGTACTGGCGCTTACAT 45139 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||||| || || || || ||||| || | || ||| | || || ||||||||| | Sbjct 45140 TGCAGGTACTAACGGTACTTCTAACGGTATCATTCCAATGGTGCGTGTTTTCAACAACAC 45199 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || || || || ||||| ||||| | |||| || |||| ||| | || | || Sbjct 45200 AGCACGTTATGTCGACCAAGGTGGCAACAAGAGGCCAGGCGCTTTTGCGATTTACTTGGA 45259 Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256 ||| ||||| || ||| | | ||||||||| | ||||||||||||| || || Sbjct 45260 GCCTTGGCATGCTGACATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGA 45319 Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316 || |||||||| | ||| ||||| ||| | || || | || ||||| | || Sbjct 45320 AATTAGAGCCAGAGATTTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATGAAGAGAGT 45379 Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGT 94376 || ||||| | ||||| | | |||| ||| |||||| ||| || || | || || Sbjct 45380 TGAACAAAACGGTGACTGGACTTTGTTTTCTCCAAATGAAGCTCCTGGTTTGGCTGATGT 45439 Query 94377 TT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC-AG 94433 | | ||| | | ||||||| ||||| || | | || || | |||||| | Sbjct 45440 CTACGGCGAT-GAG-TTTGAAGCTTTGTA----CGAAAAGTATGAGAGAG-AAGGCCGTG 45492 Query 94434 GAAGGT----TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 |||| | | | ||| ||||| ||| | ||| |||| | || |||| Sbjct 45493 GAAGATCCACCGTCAAGGCTCAAAAGCTTTGGTACTCTATCTTGGAAGCGCAAACTGAGA 45552 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || || || | ||| |||| |||||| || ||| || | ||||| || || Sbjct 45553 CAGGAACTCCATTCATGTTGTACAAGGATGCTTGTAACAAGAAAACTAACCAAAAGAACT 45612 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || | ||||| || || |||| |||||||||||||| |||| || || | Sbjct 45613 TGGGTATTATCAAATCATCTAACTTGTGTTGTGAGATTGTCGAGTACTCTTCCCCAGAAG 45672 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCAT 94637 | ||||||| |||||| ||| |||||| Sbjct 45673 AAGTTGCTGTCTGTAACTTGGCCTCCAT 45700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722872245880