Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq14 131 2e-25 seq1 109 5e-19 >seq14 Length=288459 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | |||| || || ||||||||||| || || ||| | ||| | Sbjct 84403 CTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCG 84462 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || ||||| ||||| || Sbjct 84463 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTG 84522 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||| |||| | || | || | || | |||||| |||||||| ||||| | ||| | Sbjct 84523 TCTTGAA-TTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAACTTCTAAAGTGAT 84581 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | ||| || || || |||||||| Sbjct 84582 GGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | |||| || || ||||||||||| || || ||| | |||| || Sbjct 84859 CTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCG 84918 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||||||||| || ||||| || || ||| Sbjct 84919 TCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGAATTCCCTCCTTA 84978 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| | | || | | | || | || | ||||||||||| || ||||| | || | Sbjct 84979 TCTTGGA-TCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACTTCCAATGTGAT 85037 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || |||||||| | ||||| ||||| |||||||| Sbjct 85038 GGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | |||| || || ||||||||||| || || ||| | ||| | Sbjct 84175 CTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCG 84234 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || ||||| || || || Sbjct 84235 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTG 84294 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || || | || | |||||||| || || ||||| | ||| | Sbjct 84295 TCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATG 84354 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | ||| || || || |||||||| Sbjct 84355 GTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | |||| || |||||||| || || || || || | |||| || Sbjct 84631 CTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGACAAGGTTCTACCG 84690 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || || || || || || Sbjct 84691 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATTCCCTCCTTG 84750 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || || | || | ||||||||||| || ||||| | ||| | Sbjct 84751 TCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACTTCTAAAGTGATG 84810 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| || || ||||||||||| Sbjct 84811 GTCTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845 >seq1 Length=1779567 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | |||| || |||||||||||||| || || ||| | |||| | Sbjct 999692 CTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCG 999633 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||||||||| || ||||| ||||| || Sbjct 999632 TCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTG 999573 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || || | || | |||||| || || ||||| || | |||| Sbjct 999572 TCTTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATG 999513 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| || ||||| |||||||| Sbjct 999512 GTCTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002900547880