Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq13 215 6e-51 >seq13 Length=360411 Score = 215 bits (238), Expect = 6e-51 Identities = 876/1365 (64%), Gaps = 29/1365 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||||| ||||| || |||||||| || ||||||||||||||||| | || ||| Sbjct 46237 TAAATGTTGGATGTGTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAG 46178 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCC--CCTAATGCGTT 116020 ||||| ||||| || || | || | || | |||||| || ||| || Sbjct 46177 GCTGTTGGCATCGGAGCAACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATT--TT 46120 Query 116021 CCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT---TGTCTCCCCCTCCCACATATCAAACT 116077 ||| | | |||||||| | | || || || | ||||||| || ||| Sbjct 46119 GCTTCAAAGTATCCCAGTCCCAC---AACTCGGATGGCTTTCTGTCCCACAAGTCGTACT 46063 Query 116078 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137 | | | || | ||||| || || || ||| ||||||||||||| || || ||| | Sbjct 46062 GCAACAATCCCTTTGACGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAG 46003 Query 116138 CCAATTCGG-AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 116196 | | ||| || | || || | || || ||||| || ||||| || || || ||| Sbjct 46002 CAAGCTCGATAGAT-GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTC 45944 Query 116197 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGA 116256 | | || || || | ||| || || | | | | | || ||| |||| || ||| Sbjct 45943 AACTCTTTAGCTTCCTGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGA 45884 Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 116316 ||||| || || || |||| || | | ||||||||| || ||| || ||| || Sbjct 45883 CCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACA 45824 Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376 || |||||||| || || || | || || | ||| | || |||||||| || | || Sbjct 45823 GGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCG 45764 Query 116377 TGAAGCTTTTCGTAATCAAAACTG---CGAGTCTCTTCATTGACATACTTAGGAAGG--- 116430 || | ||| || | | | | | | || | || || || || | ||||| Sbjct 45763 TGCAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTTCTCA-ACGAATGAAGGCAA 45705 Query 116431 -GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 || || || |||| ||||| |||| || || || |||||| | ||| || Sbjct 45704 AGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTC 45645 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 |||||| || || || || | |||||||||||||| || | || ||||||| Sbjct 45644 ACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACA 45585 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 ||||||||||| | ||| |||| || || ||||| ||||| | | | |||| | Sbjct 45584 AGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTA 45525 Query 116610 CCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 116668 ||| | | | | | || | || |||| | | || || || ||| |||||| || Sbjct 45524 CCAAAGCTTTTGAGCCTTG-ACGGTGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGT 45466 Query 116669 AGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728 | | || |||||||| || || | || | | || || || | || |||| | | Sbjct 45465 ACAAAGCTTCAAACTCATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAA 45406 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 | | || ||| | ||| | ||||| | ||||||||| | || |||||||| || | Sbjct 45405 ACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAG 45346 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | | ||| | ||| | | | |||||| | || || || | | || | | Sbjct 45345 CAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGA 45286 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACGA- 116907 |||| | || || || ||||| || |||| ||| | ||| | | | ||| || | Sbjct 45285 AGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAG-CGCCTGGCCTCTTG 45227 Query 116908 ---CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 ||| | |||| ||||| | || || ||| || || || | ||||||||||||| Sbjct 45226 TTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATA 45167 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATG 117024 || | ||| || || || || ||| || | ||||| | ||||||| Sbjct 45166 CCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATG 45107 Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084 |||| ||||||||| || || | ||| || ||| ||||| | | | || |||| Sbjct 45106 TGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAA 45047 Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT 117144 || || ||||| |||||| |||| | || | ||||| || ||||||||| || ||| Sbjct 45046 ATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTT 44987 Query 117145 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 117203 || ||||| || ||||| | |||||| | |||| | || || || ||||||||| Sbjct 44986 GGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAG-TATCTCTGGGACATCAA 44928 Query 117204 ATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248 || ||| || || | ||| |||||| | |||||||||||| Sbjct 44927 ATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAATACC 44883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506793551480