Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq13 215 6e-51
>seq13
Length=360411
Score = 215 bits (238), Expect = 6e-51
Identities = 876/1365 (64%), Gaps = 29/1365 (2%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| ||||||| ||||| || |||||||| || ||||||||||||||||| | || |||
Sbjct 46237 TAAATGTTGGATGTGTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAG 46178
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCC--CCTAATGCGTT 116020
||||| ||||| || || | || | || | |||||| || ||| ||
Sbjct 46177 GCTGTTGGCATCGGAGCAACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATT--TT 46120
Query 116021 CCTTGAGGGCGTCCCAGTCGTAGTTGAGCTT---TGTCTCCCCCTCCCACATATCAAACT 116077
||| | | |||||||| | | || || || | ||||||| || |||
Sbjct 46119 GCTTCAAAGTATCCCAGTCCCAC---AACTCGGATGGCTTTCTGTCCCACAAGTCGTACT 46063
Query 116078 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137
| | | || | ||||| || || || ||| ||||||||||||| || || ||| |
Sbjct 46062 GCAACAATCCCTTTGACGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAG 46003
Query 116138 CCAATTCGG-AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 116196
| | ||| || | || || | || || ||||| || ||||| || || || |||
Sbjct 46002 CAAGCTCGATAGAT-GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTC 45944
Query 116197 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGA 116256
| | || || || | ||| || || | | | | | || ||| |||| || |||
Sbjct 45943 AACTCTTTAGCTTCCTGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGA 45884
Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 116316
||||| || || || |||| || | | ||||||||| || ||| || ||| ||
Sbjct 45883 CCTTGAACTCCAAGAGCAATAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACA 45824
Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376
|| |||||||| || || || | || || | ||| | || |||||||| || | ||
Sbjct 45823 GGGTAAAAATTTCTGTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCG 45764
Query 116377 TGAAGCTTTTCGTAATCAAAACTG---CGAGTCTCTTCATTGACATACTTAGGAAGG--- 116430
|| | ||| || | | | | | | || | || || || || | |||||
Sbjct 45763 TGCAACTTATCAAAGTTGTACCAGGAACTAGATGCATCTTTCTCA-ACGAATGAAGGCAA 45705
Query 116431 -GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489
|| || || |||| ||||| |||| || || || |||||| | ||| ||
Sbjct 45704 AGCAATGGAGGCCAAGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTC 45645
Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549
|||||| || || || || | |||||||||||||| || | || |||||||
Sbjct 45644 ACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACA 45585
Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609
||||||||||| | ||| |||| || || ||||| ||||| | | | |||| |
Sbjct 45584 AGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTA 45525
Query 116610 CCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 116668
||| | | | | | || | || |||| | | || || || ||| |||||| ||
Sbjct 45524 CCAAAGCTTTTGAGCCTTG-ACGGTGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGT 45466
Query 116669 AGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728
| | || |||||||| || || | || | | || || || | || |||| | |
Sbjct 45465 ACAAAGCTTCAAACTCATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAA 45406
Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788
| | || ||| | ||| | ||||| | ||||||||| | || |||||||| || |
Sbjct 45405 ACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAG 45346
Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848
| | ||| | ||| | | | |||||| | || || || | | || | |
Sbjct 45345 CAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGA 45286
Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACGA- 116907
|||| | || || || ||||| || |||| ||| | ||| | | | ||| || |
Sbjct 45285 AGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAG-CGCCTGGCCTCTTG 45227
Query 116908 ---CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964
||| | |||| ||||| | || || ||| || || || | |||||||||||||
Sbjct 45226 TTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATA 45167
Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATG 117024
|| | ||| || || || || ||| || | ||||| | |||||||
Sbjct 45166 CCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATG 45107
Query 117025 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAG 117084
|||| ||||||||| || || | ||| || ||| ||||| | | | || ||||
Sbjct 45106 TGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAA 45047
Query 117085 ATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTT 117144
|| || ||||| |||||| |||| | || | ||||| || ||||||||| || |||
Sbjct 45046 ATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTT 44987
Query 117145 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 117203
|| ||||| || ||||| | |||||| | |||| | || || || |||||||||
Sbjct 44986 GGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAG-TATCTCTGGGACATCAA 44928
Query 117204 ATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACC 117248
|| ||| || || | ||| |||||| | ||||||||||||
Sbjct 44927 ATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAATACC 44883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506793551480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |