Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq10 129 9e-25 >seq10 Length=432243 Score = 129 bits (142), Expect = 9e-25 Identities = 528/824 (64%), Gaps = 19/824 (2%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | ||| || |||||||||||||||||||||| || ||| ||| || Sbjct 412341 CTTCTGGTAGTCCGAAACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTT 412400 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCG-GAAATCCGAGAGCCGCCA 159746 ||||| || |||||||||| | || | || |||| | | || || ||| | | Sbjct 412401 CTCCATAAAGTCGAATGGGTTGGTGACATTGTAAACCTTCTTGTTACCCAAG-GCCACAA 412459 Query 159747 GCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA 159806 |||| || || || || || |||| ||| |||||| |||||||| || |||| || Sbjct 412460 GCAATCTATCGGCAACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACA 412519 Query 159807 GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866 || | || | || || | | | || || ||||| ||| || || || | || Sbjct 412520 AGCTTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAA 412579 Query 159867 TCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCC---TTA---AACAGGA 159920 ||| | |||| | | | || ||| | ||| || | | | |||| | Sbjct 412580 TCTTCTC--CACGATAG---CTGGGTTTGGTC----TGTTGTTCAAGTGAGAGAACAACA 412630 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 ||| |||||||| ||||| || ||||| | | || || |||||||| | | | Sbjct 412631 AGCAGGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAA 412690 Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040 | || ||||| | || | | || | ||| || || | ||||| | || || | Sbjct 412691 GACCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGA 412750 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100 | || || || || || ||||| ||||| | || || |||| |||| | | ||| Sbjct 412751 AAATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTG 412810 Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 | |||| || |||||| || |||||||| ||||| || ||| |||| |||| Sbjct 412811 CGATCCATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGT 412870 Query 160161 TAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAG-CAATCAGCTTCGAGTAC 160219 | ||||| ||| ||| || || ||||| || || | |||| | ||||| Sbjct 412871 TGAACAAAAAGTCAGCCTCTTTAGGGTCTTTGATGT-AGGAGTCGATCAACAAAGAGTAG 412929 Query 160220 ATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGA 160279 |||| | ||| | ||||| || ||||| || ||||||| || | ||||| | Sbjct 412930 GTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGG 412989 Query 160280 TACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCC 160339 ||| ||||| | || | | ||| || |||| || | ||||| | || Sbjct 412990 ATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCA 413049 Query 160340 GCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCC 160399 ||||||||||||||||| |||||||| |||||||| | | | ||| || | | Sbjct 413050 GCAAAGAAAGCCAACACTCTGGAGATGAAGAATCTCTCGTTGTCAGTCATTCTGTTCTTC 413109 Query 160400 CAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 |||| | | ||||| | ||| |||| |||||||| |||| Sbjct 413110 CAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCA 413153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154673209680