Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq14 138 4e-27 seq6 113 2e-19 >seq14 Length=288459 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || |||| ||||| || || ||| | || ||||| || ||| Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| ||||| ||||||||||| ||||||||||||||||| || || Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 84498 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | || || ||| | ||||| || ||||||||| | || || || Sbjct 84497 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84438 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||||| || || ||| ||||||| Sbjct 84437 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGG 84394 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||||||||| || || ||| | || |||||||| || Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | |||| || || ||||| ||||| ||||| || ||||| || Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | || || ||| | ||||| || ||||| ||| | || || || Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || | ||||| || || ||| ||||||| Sbjct 84665 ATTCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGG 84622 Score = 113 bits (124), Expect = 2e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 |||||| | || || |||||||| |||| || || || || || | || |||||||| Sbjct 85076 ATAATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAATCT 85017 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || || | || || |||| || || ||||||||||| |||||||||||||| Sbjct 85016 TCCGACACTATCGACAACGTTAAGTCCAAGATCCAAGATAAGGAGGGAATTCCTCCTGAC 84957 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || ||| | || ||||| | || || ||| | ||||| || ||||| ||| | || || Sbjct 84956 CAGCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTAC 84897 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || || | ||||| | || | ||||| || || ||| ||||||| Sbjct 84896 AACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGG 84850 >seq6 Length=705841 Score = 113 bits (124), Expect = 2e-19 Identities = 241/357 (68%), Gaps = 5/357 (1%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||| |||| |||||| | | || || ||||| || || || || | Sbjct 387414 CTCCAGAAGAAGTTTCTTCTATGATCTTGACCAAGATGAAGGAGACTGCTGAGTCTTTCT 387473 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | ||| | | ||| | || || || | |||||||| ||||| ||||| || | ||| Sbjct 387474 TGGGTACCACCGTTTCCGACGCTGTTGTCACTGTTCCAGCTTACTTCAACGACTCTCAAA 387533 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || || ||||| || ||||||||||| || ||| | |||| || || | Sbjct 387534 GACAAGCTACCAAGGATGCTGGTTTGATTGCTGGTTTGAACGTTATGAGAATCATCAACG 387593 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAG-AAGaaaaa 451480 | || || || ||||| | || || || | ||| | | ||| || | || || Sbjct 387594 AGCCAACCGCTGCTGCCATTGCTTACGG-TTTGGACA---AGAAGTCTGAGCACGAGAAG 387649 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 || |||| | || || || |||||||||||| ||| ||| | | || |||||| Sbjct 387650 AACGTTTTGATTTTCGACTTGGGTGGAGGAACTTTCGATGTTTCCTTGTTGTCCATTGAA 387709 Query 451541 GATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || || | || ||||| ||| | ||| ||||| ||||| | || ||||||||| Sbjct 387710 GACGGTATCTTCGAAGTCAAGTCTACCGCCGGTGACACTCACTTGGGTGGTGAAGAT 387766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717058363724