Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq6 324 1e-82 seq1 192 4e-43 seq5 156 3e-32 seq31 100 2e-15 >seq6 Length=705841 Score = 324 bits (358), Expect = 1e-82 Identities = 970/1472 (66%), Gaps = 34/1472 (2%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||||| || || | ||||| |||||||| | ||||| || ||||||||||| || || Sbjct 388540 GGCAGAGACGTTCAAGATACCGTTGGCATCAATGTCAAAGGTAACTTCAATTTGTGGAAC 388481 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 ||||| |||| |||||||| || ||| | ||| | |||| || || || || Sbjct 388480 ACCTCTTGGAGCTGGTGGGATACCAGACAACTCAAACTTACCCAACAAGTTGTTGTCCTT 388421 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 ||| || |||||| || || | ||| || || | | ||| || || | || Sbjct 388420 AGTCTTGGCTCTTTCACCTTCAAAGACTTGAATCAACACACCTGGTTGGTTGTCAGCGTA 388361 Query 517438 AGTTG-TAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 517496 || | ||| ||| || || || || || || | |||||| ||| | |||| Sbjct 388360 GGTGGAGAAAGTCTC-AGACTTCTTGGTTGGGATGGTGGAGTTTCTTGGAATCAACTTGG 388302 Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT-CAACTAGGACA 517555 |||| |||||||| || || || | ||| | || | |||| |||| |||| | ||| Sbjct 388301 TCATGATACCACCGGCGGTCTCAATACCCAAGGACAATGGAGCAACATCCAACAACAACA 388242 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACC 517614 | | |||| || | ||| | |||| ||||| ||||| ||||||| ||| ||||| Sbjct 388241 A-GTCTTGAGTCTTAGAAGAAGTGTCACCAGACAAG-ATAGCAGCTTGAACAGCGGCACC 388184 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT 517674 || |||||||| ||||| || || | | | ||| | | ||||| ||||| || | Sbjct 388183 GTAAGCAACAGCCTCATCTGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGAAGTC 388124 Query 517675 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 |||| | | | ||||| ||||| | | || || ||||| | ||||| || | Sbjct 388123 AGAAACCAACTTTTGAACCTTTGGAATTCTGGTAGAACCACCAACAAGGACAATCTCGTC 388064 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGACCCG 517793 ||||| || || || | || | || || || || || || |||| |||| | Sbjct 388063 AACCTGCGACTTGTCGACCTTGGCGTCTCTCAACACCTTCTCGACTGGGTCCAAG-GTGG 388005 Query 517794 CTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA 517852 ||| ||||||||| ||| | ||| |||||| ||||||| || || || | || || Sbjct 388004 ATCTGAACAAGTCTTGACACAATTCCTCGAATCTAGCTCTGGT--GATGGAAGTGTAGAA 387947 Query 517853 -TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||||| || ||||||||||| || | || || | ||||| | ||||| || | | Sbjct 387946 GTCAATACCCTCGAACAAAGAGTCGATCTCGATAGAGGTTTGGGCAGAAGAGGACAAGGT 387887 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TC 517969 | || || | ||||| || || || | ||||| |||||| || || ||| | | Sbjct 387886 TCTCTTGGCTCTCTCACACGCAGTTCTCAATCTTCTCAAGGCTCTT--TGGTTGGTGGAC 387829 Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCA 518029 || || | || | ||||||||||| || | || | | || | | | || Sbjct 387828 AAGTCCTTCTTGTTCTTTCTCTTGAATTCGTTGACGAAGTGGTTCACCAATCTGTGGTCG 387769 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 ||||||||||| ||||| | ||| | || | |||| | |||| ||| | || ||| Sbjct 387768 AAATCTTCACCACCCAAGTGAGTGTCACCGGCGGTAGACTTGACTTCGAAGATACCGTCT 387709 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| ||||| | | ||||| ||||| ||||||| || ||||| | || ||| Sbjct 387708 TCAATGGACAACAAGGAAACATCGAAAGTTCCTCCACCCAAGTCGAAAATCAAAACGTTC 387649 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 | || | || || || || | ||| || |||| |||||||| ||||| || || Sbjct 387648 TTCTCGTGCTCAGACTTCTTGTCCAAACCGTAAGCAATGGCAGCAGCGGTTGGCTCGTTG 387589 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 518269 || ||||||| ||| || | ||||||||| || ||||| || || ||||||||||| Sbjct 387588 ATGATTCTCATAACGTTCAAACCAGCAATCAAACCAGCATCCTTGGTAGCTTGTCTTTGA 387529 Query 518270 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAA 518329 || ||||| || || || |||||||| | ||| || || | || |||| | || Sbjct 387528 GAGTCGTTGAAGTAAGCTGGAACAGTGACAACAGCGTCGGAAACGGTGGTACCCAAGAAA 387469 Query 518330 GCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATAT 518389 | || || | ||||| || | || ||||| || |||| || |||||| | | Sbjct 387468 GACTCAGCAGTCTCCTTCATCTTGGTCAAGATCATAGAAGAAACTTCTTCTGGAGTGAAG 387409 Query 518390 TGCTTGGATTCA-TTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AAT 518445 ||||| ||| |||| | | || | | | ||| ||||| | || ||| Sbjct 387408 ACCTTGGTCTCACCCTTGAACTCA-ACCTGGATTTGTGG---CTTACCGGCCTTGTCAAT 387353 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTT--TGGTCATTAAAATCTCTA 518503 || || || || ||| || || || ||| ||||| |||| | || | |||| Sbjct 387352 GACCTTGAAAGGGAAGTGCTTGATGTCACCTTG--CACTTCAGCGTCAGTGAACTTTCTA 387295 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | || || || || || | ||| |||| ||| || || |||||||| | || Sbjct 387294 CCAATAAGTCTCTTAGCGTCGAAGACAGTGTTGGCTGGGTTCATAGCAGCTTGGTTCTTA 387235 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||| ||||||| ||| || || || || | |||| | || ||||| || | Sbjct 387234 GCAGCATCACCAATCAATCTTTCAGTGTCGGTGAAAGCAACAAAGGAAGGAGTGGTTCTG 387175 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCAT-TTTGCCATA--CACCTACACAA 518680 |||||||| || || ||||||||||| || || || ||| || | | | ||||| Sbjct 387174 TTACCTTGGTCGTTGGCAATAATTTCCAC---ACGATCGTTGGCAAAGTGAGCCACACAG 387118 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || || || ||||||||||||| ||| Sbjct 387117 GAGTAGGTAGTACCCAAATCAATACCAACAGC 387086 >seq1 Length=1779567 Score = 192 bits (212), Expect = 4e-43 Identities = 676/1037 (65%), Gaps = 24/1037 (2%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| |||||||| | || || ||||| ||||| ||||| || ||||| | || || Sbjct 1703798 ATACCGTTGGCATCAATGTCGAAAGTGACCTCAATCTGAGGAACGCCTCTAGGCGCTGGA 1703739 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 || || || ||| | || | |||| || || || || || || |||| Sbjct 1703738 GGAATGCCAGACAACTCGAACTTACCCAACAAGTTGTTGTCCTTTGTTCTGGCTCTTTCA 1703679 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT- 517452 || ||| | | ||||| || | | || || || || || | || ||| Sbjct 1703678 CCTTCGTACACCTGGATCAACACACCGGGCTGGTTGTCCTGGTACGTGGAGAAGG-TCTC 1703620 Query 517453 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 |||||| || ||||| || | |||||| ||||| | || ||||| | || || || Sbjct 1703619 GGATTTCTTGGTTGGAATCGTGGCGTTTCTCTCAATCAACTTCGTCATGACTCCGCCCGC 1703560 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATC-AACTAGGACAATATTTTGAAGTTTTT 517571 ||||| | ||| | || | ||||| ||||| ||| | |||| | | || || Sbjct 1703559 GGTTTCAATACCCAACGACAAAGGAGCCACATCCAACAACAACAAGTCCTGG--GTCTTG 1703502 Query 517572 CATCAGTT-TGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 | || | | || | ||| || ||||| | ||||||||| || || ||||| || Sbjct 1703501 GAAGAGGTGTCGCCGGTCAAAATGGCGGCTTGCACAGCAGCACCGTAAGCCACAGCCTCG 1703442 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690 || || || | | | || | | || || |||||||| | |||| | | ||| Sbjct 1703441 TCCGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGAAAAAGTCCGAAACCAACT-TCTG 1703383 Query 517691 -ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 ||||| || || | | || || ||||| | ||||| || | |||||| || || || Sbjct 1703382 CACCTTTGGGATTCTGGTGGAACCACCAACAAGCACAATCTCGTCCACCTGGGACTTGTC 1703323 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 || || | ||| || || || || || |||| |||| | | ||| |||||||| | Sbjct 1703322 CAACTTGGCGTCCTTCAACACCTTCTCCACAGGGTCCAAGGTC-GATCTGAACAAGTCAG 1703264 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAA 517866 ||| | ||||||||| | ||||| || || || | || || || || |||||||| Sbjct 1703263 CACACAACTCTTCGAATCTGGCTCTGGT--GATGGAGGTGTAGAAGTCGATACCTTCGAA 1703206 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 |||||| || | |||||||| || || | || || || | | | || || | || Sbjct 1703205 CAAAGAGTCGATTTCAATCGAGGTCTGGGCAGACGACGACAAGGTTCTCTTTGCCCTCTC 1703146 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT--CAAATCTGTTTTATAT 517984 ||||| || || | ||||| || ||| | ||| ||| | ||| || | || | | Sbjct 1703145 ACATGACGTTCTCAATCTTCTCAACGCTCT--CTGGTTGGTGGACAAGTCCTTCTTGTTT 1703088 Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 || |||||||| || | ||| | | || | || | || ||||| || |||||| Sbjct 1703087 TTCCTCTTGAACTCCTGGACAAAGTGGTTGACCAACCGGTGGTCGAAATCCTCTCCTCCC 1703028 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 || | ||| | || | || || | || | ||||| || || |||| | |||||| Sbjct 1703027 AAGTGAGTGTCACCGGCAGTGGCCTTGACCTCGAAAACACCTTCGTCAATGGCCAAAAGC 1702968 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTC---TTTGTCT 518161 | ||||| || ||||| |||| || ||||| | || | | |||| | || Sbjct 1702967 GACACATCGAACGTACCACCGCCCAAGTCGAAAATTAAAACGTGCTTTTCGCCTCTGGAC 1702908 Query 518162 TGGT---TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 |||| | || || | ||| || |||| || || ||||| || ||||| || |||||| Sbjct 1702907 TGGTCCTTCTTGTCCAAACCGTAGGCAATGGCTGCCGCAGTAGGCTCATTGATGATTCTC 1702848 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 || || || | || ||||| ||||| || || |||||||||||||| || |||||| Sbjct 1702847 AAGACGTTCAAGCCGGCAATCAAACCTGCGTCCTTCGTGGCTTGTCTTTGCGAGTCGTTA 1702788 Query 518279 AAATATGCAGGAACAGT 518295 || || ||||| || || Sbjct 1702787 AAGTACGCAGGCACCGT 1702771 >seq5 Length=724248 Score = 156 bits (172), Expect = 3e-32 Identities = 462/695 (66%), Gaps = 27/695 (4%) Strand=Plus/Plus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| || ||||| ||||| | ||| | || | ||||| |||| ||||| || Sbjct 169822 TCAAAGTCCTCACCACCCAAGTGAGTGTCACCAGCGGTAGCCAAAACTTCGAAAACACCG 169881 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 | || | |||||| | || |||||| |||||| ||||||| || ||| || | Sbjct 169882 CCCTCGATAGACAACAAAGAGACATCAAAGGTTCCTCCACCCAAGTCGTAAACAATGATC 169941 Query 518147 TTCATTTC----TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202 | | | || | |||||| || | ||| || |||| |||||||||||| || Sbjct 169942 TGCTTCTCACCATCAGTCTTG-------TCCAAACCGTAGGCAATAGCAGCAGCAGTAGG 169994 Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262 || || | ||||||||| || || | |||||||| | || |||| || ||||| | Sbjct 169995 CTCGTTGACAATTCTCAACACGTTCAAGCCAGCAATAGTACCAGCATTCTTGGTGGCAAG 170054 Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA-CTTCTTTAC 518321 |||||| | |||||| || || || |||||||| | |||||| | ||| | |||||| | Sbjct 170055 TCTTTGCGCATCGTTGAAGTAAGCTGGAACAGTGACAACGGCGTGAGTGACCTTCTTGCC 170114 Query 518322 CAATATAAGCGCTT-GCCGTTTGT-TTCATTTTACTTAAAATCATTGATGAAATTTGTTC 518379 ||| || | ||| | | | || |||||||||| |||||||| | ||||| | || Sbjct 170115 CAA-GTA--CTCTTCGGCAATGGTCTTCATTTTACCCAAAATCATGGCAGAAATCTCCTC 170171 Query 518380 TGGGGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 518438 || | ||| ||||| || |||| | || | | | || ||||||| Sbjct 170172 AGGAGTGAATTCCTTGGCCTCTCCGTTGACCT-CGACGTGGACAACAGGAGTATTACCCT 170230 Query 518439 CATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAAC-ACTTTGGTCATTAAAA 518497 || | || || | ||| ||| || || || ||| || || || ||| || || Sbjct 170231 TCTTGACAATCTTGTAAGGCAAGTGCTTGATTTCCTTTTGGACGACCTT-GTCGTTGTAA 170289 Query 518498 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTG--GATTAATTGCAGCTT 518555 || ||| || |||| || |||||| || || || |||| | | | || || | Sbjct 170290 TCCAAACCGATCAATCTCTTGATATCAAAGATGGTGTT-GTTGACGTTGGAAGGC-GCCT 170347 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGA 518614 | | ||||| || |||||||||| || | ||| | ||||| | || || || ||| Sbjct 170348 GGTTCTTGGCAGCGTCTCCAATCA-ATCTCTCTTCGGCGGTAAAAGCCACGTACGAAGGA 170406 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674 || | | |||||||| || || || | |||||| ||||| || || | | ||||| Sbjct 170407 GTAATTCTGTTACCTTGGTCGTTGGCCAAAATTTCTACTTTGCCGTTCTTCATGACACCC 170466 Query 518675 ACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 |||||| |||| || || ||||| |||||||| Sbjct 170467 ACACAAGAGTAAGTGGTACCCAAATCGATACCAAT 170501 >seq31 Length=18958 Score = 100 bits (110), Expect = 2e-15 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 ||| || || | ||| || || || ||||| ||||| || || |||| || ||||||||| Sbjct 2510 GTTCTTCTCCAAACCGTAAGCCAAGGCAGCGGCAGTAGGCTCGTTAACAACTCTCAAAAC 2569 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 || | |||| |||| | || || || || |||||||||||||| | ||||||||| || Sbjct 2570 GTTCAAACCAACAATCTTACCAGCGTCCTTGGTGGCTTGTCTTTGAGCATCGTTAAAGTA 2629 Query 518284 TGCAGGAACAGTAATAACGGCAT 518306 |||||| || | ||| |||| Sbjct 2630 AGCAGGACAGGTGACAACAGCAT 2652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780819769965418