Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq13 336 3e-87 seq12 91.5 2e-13 seq1 89.7 6e-13 seq2 82.4 9e-11 >seq13 Length=360411 Score = 336 bits (372), Expect = 3e-87 Identities = 1139/1755 (65%), Gaps = 57/1755 (3%) Strand=Plus/Plus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| |||||| | || ||||| | || ||| | ||||| || ||| | || ||||| Sbjct 44847 GAAAGACCACAGCATTTGATCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAA 44906 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724 ||| | || || ||| | |||||||| | | || || || ||| | ||||| Sbjct 44907 CGTGTGATCGAAACTTACAATTTGATGTCCCAGAGATACTTTACTC-ACGGTTCTCCAAC 44965 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 | | ||||| || ||||| ||||| ||||||||||| |||||||||| |||| | || Sbjct 44966 CTTGTTCAATGCAGGTACCCCAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAA 45025 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 ||| || || ||| | || ||||||| ||| | | ||| || ||| || ||| | Sbjct 45026 GGATGACTCCATCGACGGTATTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAG 45085 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGG 111904 ||||||||||| || |||||||||| | ||||| | || ||| ||| Sbjct 45086 TGCTGGTGGTATTGGTTTGCACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGG 45145 Query 111905 TACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 111964 ||| || ||| || | ||||| ||||||||| | || || || ||| |||||| || Sbjct 45146 TACTAACGGTACTTCTAACGGTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACG 45205 Query 111965 CTATGTAAACCAAGCTGG----GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 ||||| |||||| ||| | || | || || | || | || | ||||| | Sbjct 45206 TTATGTCGACCAAGGTGGCAACAAGAGGCCA-GGCGCTTTTGCGATTTACTTGGAGCCTT 45264 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 |||| || || || | || ||| | || | | ||||| ||| | || || Sbjct 45265 GGCATGCTGACATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATTA 45324 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | | ||| | ||| | ||||| ||||| || ||| | ||||||||||||||||| Sbjct 45325 GAGCCAGAGATTTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATGAAGAGAGTTGAAC 45384 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 | | || | ||| || | |||| |||| | | || || ||| | | |||| | | Sbjct 45385 AAAACGGTGACTGGACTTTGTTTTCTCCAAATGAAGCTCCTGGTTTGGCTGATGTCTACG 45444 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 | || ||||||||||| | ||| |||||| ||| |||| | || | | | || | Sbjct 45445 GCGATGAGTTTGAAGCTTTGTACGAAAAGTATGAGAGAGAAGGCCGTGGAAGATCCACCG 45504 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | ||| | | ||| | |||| | | | ||||| ||||| || || |||| Sbjct 45505 TCAAGGCTCAAAAGCTTTGGTACTCTATCTTGGAAGCGCAAACTGAGACAGGAACTCCAT 45564 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||| | ||||| || || |||||| | || | ||| |||||||| |||||| | |||| Sbjct 45565 TCATGTTGTACAAGGATGCTTGTAACAAGAAAACTAACCAAAAGAACTTGGGTATTATCA 45624 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 | || ||| | ||| || || | || | | | ||| || ||||| | Sbjct 45625 AATCATCTAACTTGTGTTGTGAGATTGTCGAGTACTCTTCCCCAGAAGAAGTTGCTGTCT 45684 Query 112441 GTAACCTCGCATCAATCGCTCTCCC--CA-------AGTATG-TGGATCCAGAGACAAAG 112490 ||||| | || || || ||| | || || || | | || ||| || | Sbjct 45685 GTAACTTGGCCTCCATTGCTTTGCCTTCATTCGTTGAGAAAGATGCATCTAGTTCCTGGT 45744 Query 112491 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGA 112550 ||| | | ||| || | ||||| || || || ||| || | |||| | |||||| Sbjct 45745 ACA----ACTTTGATAAGTTGCACGAGGTGACCAAGGTTGTTACTAGAAACTTGAACAGA 45800 Query 112551 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 | ||||| |||||||||||||| |||||| || | | ||| ||||||||| || | Sbjct 45801 ATCATTGACAGAAATTTTTACCCTGTTGAGGAAGCCAGAAGATCCAATATGAGAAACAGA 45860 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTG---TCGCCACGC 112666 || |||| ||| || || |||||||| || |||| |||||| || ||| | || | Sbjct 45861 CCTATTGCTCTTGGAGTTCAAGGTCTTGCTGATGCATTCATGTCCTTGAGATTGC----C 45916 Query 112667 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGC 112726 || || ||| | ||||| || || | || | ||||| ||||| || ||||| || Sbjct 45917 TTTCGACTCCCAGGAAGCTAAAGAGTTGAACATTCAGATATTCGAGACCATTTATCATGC 45976 Query 112727 CGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786 ||| | || || | ||| | || ||| || ||||||||||| || | ||| || Sbjct 45977 TGCTGTGGAAGCATCTATCGAGCTTGCTCAGGAGGAAGGTCCATATGAGACATATGAAGG 46036 Query 112787 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAG---ACCAAGCT 112843 |||||| || ||| | || || | || | || ||||||| | || || || | Sbjct 46037 TTCTCCTGCGTCAAAGGGATTGTTGCAGTACGACTTGTGGGACAGAAAGCCATCCGAGTT 46096 Query 112844 TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903 | |||||||| || | ||| || | | | ||||| | | | ||| Sbjct 46097 ---GTGGGACTGGGATACTTTGAAGCAAAATTTGGCCAAACACGGTCTCAG--AAATTCT 46151 Query 112904 TT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 112961 || | | || || |||||||||||||| || | |||||||||||||| || |||||| Sbjct 46152 TTGCTTGTTGCTCCGATGCCAACAGCCTCTACTTCTCAAATCTTGGGTAACAACGAATGC 46211 Query 112962 TTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATT 113021 |||||||| ||||| | ||||| || |||||| || || || ||||| |||| Sbjct 46212 TTTGAACCTTACACATCCAACATTTACTCCAGAAGAGTGCTTGCCGGCGAGTTCCAGATT 46271 Query 113022 GTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 || ||| || | || | ||| | || | ||| | ||| | |||||||| Sbjct 46272 GTTAACCCACACATGTTGAAGGACTTAGTTGACTTAGGTATTTGGAATGACAATATGAAG 46331 Query 113082 ---GATCTCATGGTGAA-AGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGA 113137 | |||| | || | | || |||||||| | | || | ||||| || Sbjct 46332 AACAACATCATTGCCAACAAC----GGATCCATTCAGTCTTTACCAAATGTCCCAGACGA 46387 Query 113138 AATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGC 113197 ||| ||| || || || || ||||||||| |||| || ||||||||||||| Sbjct 46388 AATCAAGCGTTTATATAAAACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGC 46447 Query 113198 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGA--ATCTA-TTCATGGAA 113252 || || | | | || ||||||| ||||| ||| ||| ||| | ||| ||| Sbjct 46448 TGCCGACAGAGCTGCGTTTATTGATC--AGTCACAGTCGTTGAACATCCACATCAGAGAA 46505 Query 113253 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 113312 || || ||| ||| | |||| |||||| | ||| | ||||||||||| | || Sbjct 46506 ---CCTACTATGGGTAAGTTGACTTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAG 46562 Query 113313 ACGGGGATGTATTAC 113327 ||||| ||||| ||| Sbjct 46563 ACGGGTATGTACTAC 46577 >seq12 Length=420913 Score = 91.5 bits (100), Expect = 2e-13 Identities = 117/160 (73%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 163556 GTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGGGTGTTATT 163615 || || ||| |||| |||||||| || |||||||| || | ||||| ||||||||| Sbjct 286623 GTAGCACCAAGATCGGGTCTCGCAGTCAAACACGGAATTTCAACAGGTGCCGGTGTTATT 286682 Query 163616 GATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAAGACTTT 163675 ||| | ||||||| ||| || || || | ||||| ||||| ||| | | || |||||| Sbjct 286683 GATGCAGACTACAGGGGCGAGGTGAAGATTGTTCTTTTCAACCATTCAAAGAAGGACTTT 286742 Query 163676 GAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTG 163715 ||| | || | || || | || |||||| ||| | ||| Sbjct 286743 GAGATCAAAACTGGAGACAGAATTGCACAA-TTGGTGTTG 286781 >seq1 Length=1779567 Score = 89.7 bits (98), Expect = 6e-13 Identities = 223/333 (67%), Gaps = 13/333 (4%) Strand=Plus/Minus Query 15970 TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT-- 16027 |||||||||||||||| || ||| | |||||| | ||| ||| || ||||| || Sbjct 1280484 TATCAAAACCATCCATTTCAACCAACAACTGGTTCAAAGTAGTTTCACGCTCATCGTTGG 1280425 Query 16028 ---CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAA 16084 |||| |||| | | | | | ||||| || | |||||||||||| || | || Sbjct 1280424 CTCCGCTTGCATTTCCCTTGGATCTC--TGCTTACCAATGGCATCAATCTCGTCCACAAA 1280367 Query 16085 GACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCC 16144 || ||| |||| ||||| | || || || | || || |||||| ||| || Sbjct 1280366 CACAATGGATGGAGCGTTTTCTCTGGCAGTTTTGAACAAGTCACGCACACGCGAGGCACC 1280307 Query 16145 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT-GAAGGGGACATTA 16202 ||||||||||||||| || || || | | | || ||| | || |||||| || | Sbjct 1280306 CACACCAACAAACATTTCAACGAACTCAGAACCAGAGACA--GAATAGAAGGGAACTCCA 1280249 Query 16203 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 16262 | ||| || || ||||| ||| | | ||| ||||| ||||| || ||| | | Sbjct 1280248 GCTTCTCCTGCGGTGGCTTTGGCCAACAAAGTTTTACCGGTACCGGGAGGACCAGACAAA 1280189 Query 16263 AGGGCACCTCGTGGAATCTTGGCGCC--ACTTC 16293 | ||||| || |||||||| || || ||||| Sbjct 1280188 ATAGCACCACGGGGAATCTTAGCACCCAACTTC 1280156 >seq2 Length=922268 Score = 82.4 bits (90), Expect = 9e-11 Identities = 211/319 (66%), Gaps = 2/319 (1%) Strand=Plus/Minus Query 15972 TCAAAACCATCCATCTCTGTCAAA-AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGC 16030 ||||| || |||||||| | ||| | |||||| | ||| | ||| | ||||| || | Sbjct 594181 TCAAATCCGTCCATCTC-GACAAGCAACTGGTTCAAAGTGTTTTCTCTCTCATCGTTTCC 594123 Query 16031 TGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090 ||||| |||| | | || ||||| | |||||||| ||||||| || | ||| Sbjct 594122 GCCCATACGACCATTGCCTCTTTCTTTTCCAATAGCATCAATTTCATCAACAAAAATGAT 594063 Query 16091 GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 ||| |||| | || || || | ||||| |||||| || |||||||| Sbjct 594062 AGCTGGAGCCATTTCTCTCGCTGTTTTGAACAAATCCCTGACACGCGAAGCACCCACACC 594003 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACC 16210 |||||||||||| ||||| | | | ||| | ||| || ||| || ||||| Sbjct 594002 AACAAACATCTCAACAAACTCAGAACCAGAAACAGACAAGAAAGGAACACCAGCCTCACC 593943 Query 16211 CGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACC 16270 ||| | ||| || | ||| |||||||| ||||| || ||| | | || || || Sbjct 593942 AGCAGTAGCTTTAGCTAAAAGCGTCTTACCTGTACCAGGAGGACCAGACAAGATTGCGCC 593883 Query 16271 TCGTGGAATCTTGGCGCCA 16289 || ||| || || || ||| Sbjct 593882 TCTTGGGATTTTAGCACCA 593864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741988758160