Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq13 91.5 2e-13
seq1 91.5 2e-13
seq28 86.0 7e-12
>seq13
Length=360411
Score = 91.5 bits (100), Expect = 2e-13
Identities = 188/275 (68%), Gaps = 6/275 (2%)
Strand=Plus/Minus
Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGT 110927
|||| |||||| |||| |||||||||||| || | ||| |||| || || ||| |
Sbjct 45118 ATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTT 45059
Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987
| ||| | |||||||| || || || || |||| |||||| || || ||||| ||
Sbjct 45058 AA-TGTGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGA 45000
Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047
||| || || | || || || |||||||| | || || | | ||| | || |
Sbjct 44999 CATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAGTATCT 44940
Query 111048 TTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCT--TTACCGTGAATACCA 111105
||||||||| ||||| || |||| | | | | || | || ||||||||||||
Sbjct 44939 CTGGGACATCAAATTGTAAGTTTCGATCAC--ACGTTCAATGTCATTCCCGTGAATACCA 44882
Query 111106 ATGGCAACTCGCATGAACATATATTGAGGCGTTTC 111140
| ||||||| ||||| || || || || ||||
Sbjct 44881 ACCGCAACTCTCATGATCAAATGCTGTGGTCTTTC 44847
>seq1
Length=1779567
Score = 91.5 bits (100), Expect = 2e-13
Identities = 221/330 (67%), Gaps = 11/330 (3%)
Strand=Plus/Minus
Query 11590 TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG--- 11646
|| ||||| |||||||| | | |||||| | || ||||||||||||||||
Sbjct 1280482 TCAAAACCATCCATTTCAACCAACAACTGGTTCAAAGTAGTTTCACGCTCATCGTTGGCT 1280423
Query 11647 --GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATA 11704
| |||| | | || || | || |||||| | || |||||||| || | || |
Sbjct 1280422 CCGCTTGCATTTCCCTTG--GATCTCTGCTTACCAATGGCATCAATCTCGTCCACAAACA 1280365
Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764
| || | || ||| | | || || ||| | ||||| |||||| || || |
Sbjct 1280364 CAATGGATGGAGCGTTTTCTCTGGCAGTTTTGAACAAGTCACGCACACGCGAGGCACCCA 1280305
Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAAT-GAAGGGAACATTAGAC 11823
|||| || ||||| |||||||| | | ||| | || |||| ||||||||| ||
Sbjct 1280304 CACCAACAAACATTTCAACGAACTCAGAACCAG-AGACAGAATAGAAGGGAACTCCAGCT 1280246
Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883
|| || ||| ||||| || | | ||| ||||| ||||| || | ||||| | ||
Sbjct 1280245 TCTCCTGCGGTGGCTTTGGCCAACAAAGTTTTACCGGTACCGGGAGGACCAGACAAAATA 1280186
Query 11884 GCGCCACGGGGGATCTTGGCACC--ACTTC 11911
|| |||||||| ||||| ||||| |||||
Sbjct 1280185 GCACCACGGGGAATCTTAGCACCCAACTTC 1280156
>seq28
Length=63775
Score = 86.0 bits (94), Expect = 7e-12
Identities = 341/532 (64%), Gaps = 10/532 (2%)
Strand=Plus/Plus
Query 109516 TGATCGATGAATCGACCACGATCAGCCGCCATGTCGAT-GATACACTTTTGGCTAATTTC 109574
|| || ||||||| || | |||||| || | ||||| |||| |||||| ||||||||
Sbjct 53118 TGGTCTATGAATCTTCCTCTATCAGCAGCTA-GTCGAACGATATGCTTTTGACTAATTTC 53176
Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634
||| || || ||||| | || || | || | || ||| |||| ||||| |
Sbjct 53177 CCACACTGTTTTGTAGAGCTTTTTAAGCTCTTGAGGTATGATATCGATATTTTGGACCAG 53236
Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694
||| | | | | || | ||| || | | || ||| | || | | | |
Sbjct 53237 CCCATTATTCATAATAATCATATCTTTGACAGCCTTGTTCCAAATTCCAAGAGCTCTCAA 53296
Query 109695 ATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTA 109754
|| | |||||||| ||||||||| || ||||||||| | ||| | || |||
Sbjct 53297 GTCCTTAACAAGATACTTGTTGACTACCTGAAATTCACCTGAAAGGACCCTGCGATTGTA 53356
Query 109755 GATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGC 109814
||||| | ||| | || || ||||||||||| |||| ||||||| || || ||
Sbjct 53357 AATGTTCGATGTGAAAGGCTCAAAACACTCATTAAATCCTAAAATTTGTGATGTAGAGGC 53416
Query 109815 TGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACG 109874
|||||||| | ||| | || | | ||||| | || | | ||||||| ||||
Sbjct 53417 CGTGGGCATTGCAGCAACAAGTAAAGAGTTTCTTAAGCCGTACTTCTTTACTTGCTCCTT 53476
Query 109875 CATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTG 109934
| | |||||||||| || ||| | | ||| || ||||| ||| |||
Sbjct 53477 AAGCTCATCCCAATCAT------CAAAAAAATCCGGTTCATAATTCCACAAATCAAATTG 53530
Query 109935 AAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGC 109994
||| ||||| | || || || || | |||||| || || | |||| | | ||
Sbjct 53531 GAGTTTACCCTTTGATGCTGGTGATCCTTCGAAACTTTCATAGTAACCCTTCTCTTTGGA 53590
Query 109995 CAACTCGGATGAAGC-CTCTAGTGCCGCATGATACATAGTCTCAAAAATATG 110045
||||| || ||| || | || ||||| || ||||| |||||||| ||
Sbjct 53591 TAACTC-CATAGAGCTTTCAATGGCTGCATGGTAAATAGTTTCAAAAATCTG 53641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975609803400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |