Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 2e-13 seq1 91.5 2e-13 seq28 86.0 7e-12 >seq13 Length=360411 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/275 (68%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGT 110927 |||| |||||| |||| |||||||||||| || | ||| |||| || || ||| | Sbjct 45118 ATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTT 45059 Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987 | ||| | |||||||| || || || || |||| |||||| || || ||||| || Sbjct 45058 AA-TGTGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGA 45000 Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047 ||| || || | || || || |||||||| | || || | | ||| | || | Sbjct 44999 CATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAGTATCT 44940 Query 111048 TTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCT--TTACCGTGAATACCA 111105 ||||||||| ||||| || |||| | | | | || | || |||||||||||| Sbjct 44939 CTGGGACATCAAATTGTAAGTTTCGATCAC--ACGTTCAATGTCATTCCCGTGAATACCA 44882 Query 111106 ATGGCAACTCGCATGAACATATATTGAGGCGTTTC 111140 | ||||||| ||||| || || || || |||| Sbjct 44881 ACCGCAACTCTCATGATCAAATGCTGTGGTCTTTC 44847 >seq1 Length=1779567 Score = 91.5 bits (100), Expect = 2e-13 Identities = 221/330 (67%), Gaps = 11/330 (3%) Strand=Plus/Minus Query 11590 TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG--- 11646 || ||||| |||||||| | | |||||| | || |||||||||||||||| Sbjct 1280482 TCAAAACCATCCATTTCAACCAACAACTGGTTCAAAGTAGTTTCACGCTCATCGTTGGCT 1280423 Query 11647 --GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATA 11704 | |||| | | || || | || |||||| | || |||||||| || | || | Sbjct 1280422 CCGCTTGCATTTCCCTTG--GATCTCTGCTTACCAATGGCATCAATCTCGTCCACAAACA 1280365 Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764 | || | || ||| | | || || ||| | ||||| |||||| || || | Sbjct 1280364 CAATGGATGGAGCGTTTTCTCTGGCAGTTTTGAACAAGTCACGCACACGCGAGGCACCCA 1280305 Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAAT-GAAGGGAACATTAGAC 11823 |||| || ||||| |||||||| | | ||| | || |||| ||||||||| || Sbjct 1280304 CACCAACAAACATTTCAACGAACTCAGAACCAG-AGACAGAATAGAAGGGAACTCCAGCT 1280246 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 || || ||| ||||| || | | ||| ||||| ||||| || | ||||| | || Sbjct 1280245 TCTCCTGCGGTGGCTTTGGCCAACAAAGTTTTACCGGTACCGGGAGGACCAGACAAAATA 1280186 Query 11884 GCGCCACGGGGGATCTTGGCACC--ACTTC 11911 || |||||||| ||||| ||||| ||||| Sbjct 1280185 GCACCACGGGGAATCTTAGCACCCAACTTC 1280156 >seq28 Length=63775 Score = 86.0 bits (94), Expect = 7e-12 Identities = 341/532 (64%), Gaps = 10/532 (2%) Strand=Plus/Plus Query 109516 TGATCGATGAATCGACCACGATCAGCCGCCATGTCGAT-GATACACTTTTGGCTAATTTC 109574 || || ||||||| || | |||||| || | ||||| |||| |||||| |||||||| Sbjct 53118 TGGTCTATGAATCTTCCTCTATCAGCAGCTA-GTCGAACGATATGCTTTTGACTAATTTC 53176 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 ||| || || ||||| | || || | || | || ||| |||| ||||| | Sbjct 53177 CCACACTGTTTTGTAGAGCTTTTTAAGCTCTTGAGGTATGATATCGATATTTTGGACCAG 53236 Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 ||| | | | | || | ||| || | | || ||| | || | | | | Sbjct 53237 CCCATTATTCATAATAATCATATCTTTGACAGCCTTGTTCCAAATTCCAAGAGCTCTCAA 53296 Query 109695 ATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTA 109754 || | |||||||| ||||||||| || ||||||||| | ||| | || ||| Sbjct 53297 GTCCTTAACAAGATACTTGTTGACTACCTGAAATTCACCTGAAAGGACCCTGCGATTGTA 53356 Query 109755 GATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGC 109814 ||||| | ||| | || || ||||||||||| |||| ||||||| || || || Sbjct 53357 AATGTTCGATGTGAAAGGCTCAAAACACTCATTAAATCCTAAAATTTGTGATGTAGAGGC 53416 Query 109815 TGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACG 109874 |||||||| | ||| | || | | ||||| | || | | ||||||| |||| Sbjct 53417 CGTGGGCATTGCAGCAACAAGTAAAGAGTTTCTTAAGCCGTACTTCTTTACTTGCTCCTT 53476 Query 109875 CATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTG 109934 | | |||||||||| || ||| | | ||| || ||||| ||| ||| Sbjct 53477 AAGCTCATCCCAATCAT------CAAAAAAATCCGGTTCATAATTCCACAAATCAAATTG 53530 Query 109935 AAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGC 109994 ||| ||||| | || || || || | |||||| || || | |||| | | || Sbjct 53531 GAGTTTACCCTTTGATGCTGGTGATCCTTCGAAACTTTCATAGTAACCCTTCTCTTTGGA 53590 Query 109995 CAACTCGGATGAAGC-CTCTAGTGCCGCATGATACATAGTCTCAAAAATATG 110045 ||||| || ||| || | || ||||| || ||||| |||||||| || Sbjct 53591 TAACTC-CATAGAGCTTTCAATGGCTGCATGGTAAATAGTTTCAAAAATCTG 53641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975609803400