Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq13 297 2e-75 seq12 82.4 9e-11 >seq13 Length=360411 Score = 297 bits (328), Expect = 2e-75 Identities = 1127/1746 (65%), Gaps = 41/1746 (2%) Strand=Plus/Minus Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655 |||||||| || ||||| | ||| | ||||| |||| | ||||| |||| | ||| Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGAC 105713 ||| || || | ||| | |||| ||| ||||| | ||||| || | Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACT--GATCAATAAACGCAG 46459 Query 105714 CACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGA 105773 | | | || ||||| ||||||| || |||| |||||||||||| || || | Sbjct 46458 CTCTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATA 46399 Query 105774 GATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCA 105833 | |||||| || ||||||| || || | | ||||| || || ||| | | Sbjct 46398 AACGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTG---TTGGCAA 46342 Query 105834 TGAGATC---CTTCATATCCTTGGACCAAAGACCAA--TCTTCTTGAGATCATTGACGAG 105888 ||| | |||||||| | ||||| ||| | || || || || || | | Sbjct 46341 TGATGTTGTTCTTCATATTGTCATTCCAAATACCTAAGTCAACTA-AG-TCCTTCAACAT 46284 Query 105889 ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGT 105948 || ||| |||||| ||||| || || || |||||| || ||||| | || Sbjct 46283 GTGTGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGT 46224 Query 105949 GTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGG 106008 ||| |||||||||||||| || |||||||||||||| | || |||||||||||||| || Sbjct 46223 GTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGG 46164 Query 106009 TGCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 || | | ||||| | | | ||||| | || | || ||| | | |||| Sbjct 46163 AGCAACAAGCAAAGAATTT--CTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATCC 46106 Query 106067 CAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124 ||||| | | | | | |||| ||||||| || | || | || || | | Sbjct 46105 CAGTCCCACAACTCGGATGGCTTTCTG--TCCCACAAGTCGTACTGCAACAATCCCTTTG 46048 Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTC 106183 ||| |||||||| ||| |||||||||| | ||||| | | ||| | || | || | Sbjct 46047 ACGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGAT- 45989 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243 || |||| | || ||||| ||||| || || || || |||| ||| || ||||| Sbjct 45988 GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCC 45929 Query 106244 TCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 | || || || | | | | | || ||| |||| || ||||||||||| || | | Sbjct 45928 TGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGA 45869 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363 |||||||||||| || |||||| || ||| || |||||| || |||||||||||| Sbjct 45868 GCAATAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTG 45809 Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA--- 106420 ||||||| || ||| | ||| | ||||||| ||| || | || || | || ||| Sbjct 45808 TCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAG 45749 Query 106421 TAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGATGCCAA 106476 | | | | | || | || || || || ||||| || || || ||||| Sbjct 45748 TTGTACCAGGAACTAGATGCATCTTTCTCA-ACGAATGAAGGCAAAGCAATGGAGGCCAA 45690 Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536 || || ||||| || || | |||||| | ||| || ||||||||| || Sbjct 45689 GTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGA 45630 Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596 || || | ||||| |||||||||||| | || ||||| || ||||||||||| | Sbjct 45629 TGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAA 45570 Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGG 106655 |||| | || || || ||||| || || | | | || | | ||| | | | | | Sbjct 45569 CATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGC 45510 Query 106656 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 106715 || | || ||| | | || || || ||| |||||| ||| | |||||||||| Sbjct 45509 CTTG-ACGGTGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGTACAAAGCTTCAAACT 45451 Query 106716 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 106775 | || || | || | | ||| || || | | |||| | || | || ||| | || Sbjct 45450 CATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCAC 45391 Query 106776 CACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 106835 | | ||||| | ||||||||| | || || ||||| || | | || | ||||| Sbjct 45390 CGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTC 45331 Query 106836 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCG 106895 | | | ||||| | ||| ||||| || | || | ||| || | || || | Sbjct 45330 TGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAG 45271 Query 106896 CGTGCCATGGCTCAAGATAGACTGCGATAGATC----CCTTTCGACGCCCAGCTTGATTT 106951 | ||||| ||||| | || | || | || | ||| | | | ||| |||| | Sbjct 45270 CATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTG-CCACCTTGGTCG 45212 Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011 ||||| || |||||| ||| || || || | ||||||||| ||||| | || ||| Sbjct 45211 ACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCG 45152 Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071 || || || ||| || | | ||| | | |||||||||| |||||||| Sbjct 45151 TTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACCA 45092 Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131 ||||| | ||| || ||| || || | | | || | || ||||||| ||| ||| Sbjct 45091 CCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAG 45032 Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191 || ||||| |||| | |||||| ||| ||||| || || ||||| ||||| |||||| Sbjct 45031 TCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTG 44972 Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAA 107250 || | |||||| | ||||| | || || || ||||||||| | ||| || || | Sbjct 44971 AACAAGGTTGGAGAACCGTGAGT-AAAGTATCTCTGGGACATCAAATTGTAAGTTTCGAT 44913 Query 107251 GACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 ||| |||||||| | |||||| || || | || || | ||| | || | || || Sbjct 44912 CACACGTTCAATGTCATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTGG 44853 Query 107311 TGTTTC 107316 | |||| Sbjct 44852 TCTTTC 44847 >seq12 Length=420913 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 155021 CCATTCTCATGCCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGA 155080 ||||| || | |||| ||| || || | || |||||| |||| |||||||| || | Sbjct 286591 CCATTATCGTTCCAATTGGAACCTACGGAAGAGTAGCACCAAGATCGGGTCTCGCAGTCA 286650 Query 155081 AGCATGGTATTCAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAG 155140 | || || ||| | ||||| |||||||||||| | ||||| | || || || || Sbjct 286651 AACACGGAATTTCAACAGGTGCCGGTGTTATTGATGCAGACTACAGGGGCGAGGTGAAGA 286710 Query 155141 TCGTTCTCTTCAATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCAC 155200 | ||||| ||||| || | | || ||||||||| | || | || || | || |||| Sbjct 286711 TTGTTCTTTTCAACCATTCAAAGAAGGACTTTGAGATCAAAACTGGAGACAGAATTGCAC 286770 Query 155201 AACTTGTCCTTGAGC 155215 || | || | |||| Sbjct 286771 AATTGGTGTTGGAGC 286785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980409137720