Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq10 233 2e-56
seq13 203 4e-47
>seq10
Length=432243
Score = 233 bits (258), Expect = 2e-56
Identities = 569/853 (67%), Gaps = 7/853 (1%)
Strand=Plus/Plus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
|| || || || | |||||| || || || || || || ||||| | || || ||
Sbjct 412342 TTCTGGTAGTCCGAAACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTC 412401
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| || ||||| || | ||||| || | || ||| || || | | ||
Sbjct 412402 TCCATAAAGTCGAATGGGTTGGTGACATTGTAAACCTTCTTGTTACCCAAGGCCACAAGC 412461
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| |||||| || || || | | ||| | ||||| ||||| |||||||| | ||
Sbjct 412462 AATCTATCGGCAACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAG 412521
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
| | || | ||||| |||| |||||| ||| ||| | || ||||| | |||||
Sbjct 412522 CTTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATC 412581
Query 18910 GATACAACTCTATCTTCATTAGGAGGGTA-TAGAAGATGTTTAAACATCAAACATGCAAA 18968
| || || || || || || | ||| || |||| ||| || |||||
Sbjct 412582 TTCTCCACGATAGCTGGGTTTGGTCTGTTGTTCAAG-TGAGAGAACAACAAGCAGGCAAA 412640
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
||| || | || |||||||| | |||||||| || || || || | |||||||||
Sbjct 412641 GTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCAGGCAT 412700
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| ||||| || || |||||||| ||||| ||||| || ||||| ||||| ||||||||
Sbjct 412701 CAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATACCTTC 412760
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTA-GCATCATTATTATGAATCCATT 19147
|| || ||||| || || | |||||| || ||| | || || | | ||||||
Sbjct 412761 GACAGCAGCAAAGGCCACCAATCTTTCGGCA-AACAAGGCCTCGTCGTCTGCGATCCATC 412819
Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGAT 19207
||| ||||| || |||||||| || | || || || | || |||| || || | |
Sbjct 412820 TCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAACAAAA 412879
Query 19208 ACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267
| | ||| | | ||||| | || | || ||||| ||| ||| |||| || |
Sbjct 412880 AGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGATCAACAAAGAGTAGGTTTCCGAGT 412939
Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327
| || ||||| || ||||| |||||||| |||||| | || |||| ||||| || |
Sbjct 412940 GGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTGGACCT 412999
Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387
|| | |||| | || ||||| || ||||| || ||||| || ||| ||||| || |
Sbjct 413000 CAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAAGAAAG 413059
Query 19388 CTAATAC-ATGTTTAATAA-AATGT-TTTTCATCTGAGGTTAATGTATTCCAATCATTAA 19444
| || || || | || ||| | | | || | || | ||||| || || |
Sbjct 413060 CCAACACTCTGGAGATGAAGAATCTCTCGTTGTCAGTCATTCTGTTCTTCCAGTCGTTGA 413119
Query 19445 TATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACA 19504
| ||||| || || || | |||||| | ||||| ||||| || || || ||||| ||||
Sbjct 413120 TGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTTTTGTACA 413179
Query 19505 TGTTCCATATATC 19517
| | ||| || ||
Sbjct 413180 TTTGCCAAATCTC 413192
>seq13
Length=360411
Score = 203 bits (224), Expect = 4e-47
Identities = 567/863 (66%), Gaps = 20/863 (2%)
Strand=Plus/Minus
Query 47956 ATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCA 48015
|||||||| ||||||| || | || ||| | |||||||| || |||||||| | ||
Sbjct 45627 ATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACA 45568
Query 48016 TAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCT 48075
| || || ||||| || || | || | ||| | |||||| | ||||| | |||||
Sbjct 45567 TGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCT 45508
Query 48076 TTATAACAGCTCTA-----GCTTTAT-TATCATGTTCGTATTTAGTATATAACTTCTCAA 48129
| | | ||| || || | | |||| | ||| ||| | | |||| ||
Sbjct 45507 TGACGGTGGATCTTCCACGGCCTTCTCTCTCATACT----TTTCGTACAAAGCTTC--AA 45454
Query 48130 ATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAAT 48189
| ||||| || || |||| | | || |||||| |||||| ||| | | ||| | ||| |
Sbjct 45453 ACTCATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGT 45394
Query 48190 CCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAAT 48249
| | | | || ||||| |||| || | ||| || ||||||||||| || ||||
Sbjct 45393 CACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAAT 45334
Query 48250 CCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATAT 48309
| || | ||| | |||||| || || ||| || ||| || | ||||| | || |
Sbjct 45333 CTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGT 45274
Query 48310 CAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGAT 48369
|||||||||| || || || || || || | | ||||| | || || || ||||| |
Sbjct 45273 CAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGT 45214
Query 48370 CTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATAC 48429
| | ||| | || || ||||| |||| | | |||||| | ||||| || || |||
Sbjct 45213 CGACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTAC 45154
Query 48430 CATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATA 48488
| || || || | ||| ||| ||| || ||| || || || || || ||| |||
Sbjct 45153 CGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAA-ACCAATA 45095
Query 48489 CCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATA 48548
||||| || | || || |||| ||| || || | || || ||||| || || ||
Sbjct 45094 CCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATG 45035
Query 48549 CTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAA 48608
||||| |||| | || |||||| |||||||| || || |||| |
Sbjct 45034 GAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCA 44975
Query 48609 TTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCA 48668
|| || || |||||||| | ||| |||| || ||| || | ||| || || |||||
Sbjct 44974 TTGAACAAGGTTGGAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCG 44915
Query 48669 ATAACAGAATCTATATCCCATT--GATGTATACCTATAGATACACGCATTAACATATATT 48726
|| ||| || || | |||| || ||||| | | || | ||| | || || |
Sbjct 44914 ATCACACGTTCAATGT--CATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCT 44857
Query 48727 GAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAA 48786
| ||||||||| ||| || || | | | | | |||||| ||||||| || || |
Sbjct 44856 GTGGTCTTTCAGCAACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGA 44797
Query 48787 AACCAAAATAGTTGTA--TGAAA 48807
|||| || |||||||| |||||
Sbjct 44796 AACCGAAGTAGTTGTAGTTGAAA 44774
Score = 107 bits (118), Expect = 2e-18
Identities = 306/467 (66%), Gaps = 9/467 (2%)
Strand=Plus/Minus
Query 46977 TCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTC 47036
|| |||||||||| || | | | || | || |||| || || |||||||| |||
Sbjct 46621 TCAACAGTAAACTGGATCGCAGCAGCAGCAGCTTGCGTTCTCAAGTAGTACATACCCGTC 46562
Query 47037 TTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCT 47096
|| || || ||||||| || || ||||| ||| || ||| | ||||||||
Sbjct 46561 TTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTACCCATAGTAGGTTCT 46502
Query 47097 GAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATA 47156
|| || || || | || || |||||||||||| ||| |||| || || |||||
Sbjct 46501 CTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCTCTGTCGGCAGCCATG 46442
Query 47157 TCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCT 47216
|| | ||| | | || | || ||||| || |||||||| | | || || || |||
Sbjct 46441 TCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAACGCTTGATTTCGTCT 46382
Query 47217 GGGAGATTAG---TATTTTGAATAGATCCTCCgttttctataattttgtttttta-at-- 47270
|||| ||| | | ||||| ||||| ||| | || || ||||| || | ||
Sbjct 46381 GGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATGTTGTTCTTCATATTG 46322
Query 47271 tcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTGA 47330
||||| ||||| | ||| ||| || || | || || |||||||| ||
Sbjct 46321 TCATT---CCAAATACCTAAGTCAACTAAGTCCTTCAACATGTGTGGGTTAACAATCTGG 46265
Query 47331 AATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCA 47390
|| || || | || ||||| | | || || || ||| || ||||| | ||||
Sbjct 46264 AACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTAAGGTTCAAAGCATTCG 46205
Query 47391 TTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAAC 47437
|| || || || ||||||| ||| || ||||| ||||| | |||||
Sbjct 46204 TTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGCAAC 46158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108427602920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |