Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 165 7e-35 seq11 111 1e-18 seq14 96.9 3e-14 seq1 93.3 3e-13 >seq6 Length=705841 Score = 165 bits (182), Expect = 7e-35 Identities = 459/692 (66%), Gaps = 24/692 (3%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 |||||||| || || |||||||| || | | || ||| | | |||||| |||| || Sbjct 387860 AGAACTGCGTGTGAGAGAGCCAAGAGAACCTTGTCCTCTTCTGCCCAAACCTCTATCGAG 387919 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || || || || ||||| ||||| | | || | || | || || | ||| || Sbjct 387920 ATCGACTCTTTGTTCGAGGGTATTGACTTCTACACTTCCATCACCAGAGCTAGATTCGAG 387979 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| || | || ||| || | || ||||| || | || || ||||| Sbjct 387980 GAATTGTGTCAAGACTTGTTCAGATCCACCTTGGACCCAGTCGAGAAGGTGTTGAGAGAC 388039 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||| | || || || | || | || ||||| ||||||||||| ||||| |||||| Sbjct 388040 GCCAAGGTCGACAAGTCGCAGGTTGACGAGATTGTCCTTGTTGGTGGTTCTACCAGAATT 388099 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206 || || ||| ||| ||| |||| | ||| || ||||| | ||| |||| Sbjct 388100 CCAAAGGTTC---AAAAGTTGGTTTCTGACTTCTTCAACGGTAAGGAGCCAAAC--AAGT 388154 Query 552207 G--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | || ||||||||||||||||| || |||||||| ||||||| ||||| | |||| Sbjct 388155 CCATCAACCCAGATGAGGCTGTTGCTTACGGTGCCGCTGTTCAAGCTGCTATCTTGTCTG 388214 Query 552265 GACAAACTGATGAAAA-ACTACAAAATATTGTACTTGTAG-ATGTTACTCCTCTATCTCT 552322 | | ||| | || ||| ||| | |||| |||| | ||||| |||| | || | Sbjct 388215 GTGACACTTCTTCTAAGACT-CAAGAC-TTGTTGTTGTTGGATGTTGCTCCATTGTCCTT 388272 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | || || | || ||||| ||||| || | || ||||| | || || || Sbjct 388273 GGGTATTGAGACCGCCGGTGGTATCATGACCAAGTTGATTCCAAGAAACTCCACCATCCC 388332 Query 552383 TTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 || || ||| | | ||| || || || | || || ||| | | ||| |||| Sbjct 388333 AACCAAGAAGTCT-GAGACTTTCTCCACCTACGCTGACAACCAACCAGGTGTGTTGATTC 388391 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG----GTACTTTT 552497 || | |||||||| |||||| ||||| || || ||||||| ||| ||| Sbjct 388392 AAGTCTTTGAAGGTGAAAGAGCCAAGACTAAGGACAA----CAACTTGTTGGGTAAGTTT 388447 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | || ||||| || || ||||| | || || || |||||||||||||| || || Sbjct 388448 GAGTTGTCTGGTATCCCACCAGCTCCAAGAGGTGTTCCACAAATTGAAGTTACCTTTGAC 388507 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || |||||||| || || ||||| || |||| Sbjct 388508 ATTGATGCCAACGGTATCTTGAACGTCTCTGC 388539 Score = 138 bits (152), Expect = 9e-27 Identities = 367/549 (67%), Gaps = 24/549 (4%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG--TTTGGCAAA-ATGG 550047 |||| | ||||| ||||| || || || || ||||| | | |||| ||| || | Sbjct 387085 AGCTGTTGGTATTGATTTGGGTACTACCTACTCCTGTGTGGCTCACTTTGCCAACGATCG 387144 Query 550048 TAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTT 550107 | || |||||||||||||| || |||||||||||||| ||||| || | |||| |||| Sbjct 387145 T---GTGGAAATTATTGCCAACGACCAAGGTAACAGAACCACTCCTTCCTTTGTTGCTTT 387201 Query 550108 CACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTAC 550167 ||| || |||||| || |||||||||| || || | ||||| || || || | Sbjct 387202 CACCGACACTGAAAGATTGATTGGTGATGCTGCTAAGAACCAAGCTGCTATGAACCCAGC 387261 Query 550168 CAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCA 550227 ||| ||| | || || ||||| | | ||||| |||| || | ||| | || || Sbjct 387262 CAACACTGTCTTCGACGCTAAGAGACTTATTGGTAGAAAGTTCACTGACGCTGAAGTGCA 387321 Query 550228 GGCAGATATGAAGCATTGGCCTTTCCA---AATTGTTAATGTTTCTGGAAAACCTTATAT 550284 | || || ||||| | |||||| | |||| || | | || || || | || Sbjct 387322 AGGTGACATCAAGCACTTCCCTTTCAAGGTCATTGACAAGG---CCGGTAAGCCACAAAT 387378 Query 550285 TGAAGCT-ACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCT 550339 | | | | | | |||| | | | ||| | |||| |||||| || |||| ||| Sbjct 387379 CCAGGTTGAGT--TCAAGGGTGAG---ACCAAGGTCTTCACTCCAGAAGAAGTTTCTTCT 387433 Query 550340 ATGGTTTTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGA 550398 ||| | || | || ||||| | || || ||| |||| | ||| ||| | || Sbjct 387434 ATGATCTTGACCAAGATGAAGGAGACTGCTGAGT-CTTTCTTGGGTACCACCGTTTCCGA 387492 Query 550399 TGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGC 550458 || || | ||||| ||||| || || || ||||| ||| | |||||||| || ||||| Sbjct 387493 CGCTGTTGTCACTGTTCCAGCTTACTTCAACGACTCTCAAAGACAAGCTACCAAGGATGC 387552 Query 550459 TGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACT 550518 ||| |||||||| | || ||| | | || ||||| || || || |||||||| | Sbjct 387553 TGGTTTGATTGCTGGTTTGAACGTTATGAGAATCATCAACGAGCCAACCGCTGCTGCCAT 387612 Query 550519 TGCATATGG 550527 ||| || || Sbjct 387613 TGCTTACGG 387621 >seq11 Length=428666 Score = 111 bits (122), Expect = 1e-18 Identities = 185/262 (71%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 368596 TCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAA 368655 || |||| || | |||||| || ||||| || | ||| ||||| ||| ||| ||| Sbjct 85248 TCCAGAAACAGATATTGGGGTACCCCAATGCCTATCTGGGTTTCTGACGATTATGAGGAA 85189 Query 368656 ATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGT-GTGCAAAATATTAG 368714 |||| ||| | ||||| ||| |||||| | ||||| |||||| ||| | | || | Sbjct 85188 GTTGTGTGTGTCGGTTCTATTGCTGAATTGAAGGAATTGTCTGGTCGTG-ATGACATAAC 85130 Query 368715 TGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTT 368774 || | || | || | || || ||||| | ||||| || |||| || |||||| Sbjct 85129 CGACATCCACAGAGAAAGCATCGACCACATCACCATTCCTTCTAAGATGGGCAAAGGTCA 85070 Query 368775 ATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATG- 368833 |||| || |||| | ||| || ||||| ||||||||||| ||||| ||||| |||| Sbjct 85069 ATTGAAGAGAATTGAGGAAGTGTTTGATTGTTGGTTTGAATCTGGTTCGATGCCATATGC 85010 Query 368834 GTCAAATACATTATCCATTTGA 368855 || | |||||| |||||||| Sbjct 85009 CTCTCA-ACATTACCCATTTGA 84989 >seq14 Length=288459 Score = 96.9 bits (106), Expect = 3e-14 Identities = 138/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || ||||| || | | |||||| ||||| | ||| || || || || || Sbjct 84431 TTTGG--ATGTTGTAGTCGGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGAT 84488 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | ||||||||| || |||||||||||||| || ||||||||||| ||| || || Sbjct 84489 CAATCTTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTAGATTTAACGTTGTC 84548 Query 563406 AATTGTATCAGTGTGAGT-ACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| || |||| || | | ||| | ||| | || ||||| || | ||| ||||||| Sbjct 84549 AATGGTGTCAG-AAGACTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGA 84607 Query 563465 AAATTTGCATA 563475 | ||||||||| Sbjct 84608 AGATTTGCATA 84618 >seq1 Length=1779567 Score = 93.3 bits (102), Expect = 3e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 390807 ATTAATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGT 390866 || |||||| | |||||||| ||| ||||||| | | | || ||||| || Sbjct 1218953 ATCAATACCGTCTTCACCATAGACAAATTGAATGATATCACCCAAGGAGTTTCTAGTTGT 1218894 Query 390867 ACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACC 390926 ||||||||| | || |||| || ||||| || || || | ||| || ||||| Sbjct 1218893 ACCATCATAATGGACCATAATATCCTCTAAAGCCTTGACCAAACGACGTTGAATGTAACC 1218834 Query 390927 AGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAA 390986 ||| |||||||| || | ||||||| ||||| ||| ||||| || ||||| | ||||| Sbjct 1218833 AGTCTCTGCAGTCTTGACAGCAGTATCAATAAGACCCTCTCTACCAGCCATGGCGTGGAA 1218774 Query 390987 GAAAAATTC 390995 |||||| || Sbjct 1218773 GAAAAACTC 1218765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293197120970