Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq14 82.4 6e-11 seq1 82.4 6e-11 >seq14 Length=288459 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| || | ||| ||| ||||| || ||||| || || | | ||| |||| Sbjct 84177 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTC 84236 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| |||||||| || || |||| || || || || | |||| ||||||||||| Sbjct 84237 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTC 84296 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| || ||| | | || || |||| || || || | || || || Sbjct 84297 TTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGT 84356 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || || || || ||||| Sbjct 84357 CTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389 >seq1 Length=1779567 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||||||||| || | || || ||||| || ||||| || || | ||| |||| Sbjct 999690 CAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 999631 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| |||||||||||||| |||| || || || || | |||| || |||||||| Sbjct 999630 CTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTC 999571 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||||| || ||| | | | || || | || ||||||| ||||| || Sbjct 999570 TTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGT 999511 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||||||| || ||||| || ||||| Sbjct 999510 CTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937353938119