Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq14 82.4 6e-11
seq1 82.4 6e-11
>seq14
Length=288459
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || | ||| ||| ||||| || ||||| || || | | ||| ||||
Sbjct 84177 CAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTGCCGTC 84236
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| |||||||| || || |||| || || || || | |||| |||||||||||
Sbjct 84237 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATTCCCTCCTTGTC 84296
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| || ||| | | || || |||| || || || | || || ||
Sbjct 84297 TTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACTTCTAAAGTGATGGT 84356
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||| || || || || |||||
Sbjct 84357 CTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
>seq1
Length=1779567
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || | || || ||||| || ||||| || || | ||| ||||
Sbjct 999690 CAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTC 999631
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| |||||||||||||| |||| || || || || | |||| || ||||||||
Sbjct 999630 CTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTC 999571
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| || ||| | | | || || | || ||||||| ||||| ||
Sbjct 999570 TTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGACCTCCAAGGTAATGGT 999511
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || |||||||| || ||||| || |||||
Sbjct 999510 CTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937353938119
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |