Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq10 156 8e-33 >seq10 Length=432243 Score = 156 bits (172), Expect = 8e-33 Identities = 550/848 (65%), Gaps = 22/848 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||||||| ||||| ||||| || ||||| ||||| || |||| || |||||||| Sbjct 412344 CTGGTAGTCCGAAACTCTCTTCTCGAAAAAGTTGGTCTTTCCTGCCAAGGAAATGTTCTC 412403 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||| ||| ||| ||||||| || || ||| | ||| | |||| | ||| Sbjct 412404 CATAAAGTCGAATGGGTTGGTGACATTGTAAACCTTCTTGTTA--CCCAAGGCCACAAGC 412461 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 | ||| || ||| |||||| ||||| |||| | | |||||| || | | | Sbjct 412462 AATCTATCGGCAACGAACTCGACGTATTGGCACATCAAGTCACAGTTCATTCCCAACAAG 412521 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | ||||| || | || | | || || || || ||||| || | |||| Sbjct 412522 CTTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATAGTGACGGCCTCAGTAATAATC 412581 Query 48077 TGCTTAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || ||| | ||| | ||| ||||| || ||| | | | || |||| Sbjct 412582 TTCTCCACGATAG---CTGGGTTTGGTCTGTTGTTCAAGTGAGAGA---ACAACAAGCAG 412635 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| ||||||| |||||||| | || || | |||||||||| |||||| Sbjct 412636 GCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTTGGAGAACGTAAGACCA 412695 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || |||| || | |||||| || | || || |||||||||||||| || Sbjct 412696 GGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAAACGAGCCAGAGAAGAAAATA 412755 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 || || || || || || || | || || | || | || | | ||||| |||| Sbjct 412756 CCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACAAGGCCTCGTCGTCTGCGATC 412815 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | ||||| || ||||||||||| ||||| || || | || || || ||| Sbjct 412816 CATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGATGTTTTCGATAGCGTTGAAC 412875 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGT-GAGCAGCTTTGCGTACATCTC 48432 | | ||| | ||| | |||| ||| || || | | ||| | || Sbjct 412876 AAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGG-AGTCGATCAACAAAGAGTAGGTTTC 412934 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 ||||| | || || || ||||||||| |||||||| ||||||| | ||| Sbjct 412935 CGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAACATTTGGCCTCTGGGATCTG 412994 Query 48493 CACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAA 48552 || || | || || |||||| || ||||||||||| || || || ||||||||||| Sbjct 412995 GACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAATTCCGTCCGAAGCAGCAAA 413054 Query 48553 GAAGGCAAGGACATGTTTA-AGGAAATGGCGCTCGTTGTGGGTGA----GAGCATTCCAG 48607 ||| || | || | | | | ||| | |||||||| || | | | |||||| Sbjct 413055 GAAAGCCAACAC-TCTGGAGATGAAGAATCTCTCGTTGTCAGTCATTCTGTTC-TTCCAG 413112 Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667 | | | |||||| || ||| | ||||||| |||||||||| || || || ||| Sbjct 413113 TCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAGAAAGATGCTTCGGCCTTT 413172 Query 48668 TTGTACAT 48675 |||||||| Sbjct 413173 TTGTACAT 413180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532182859520