Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq10 141 2e-28
seq13 129 1e-24
>seq10
Length=432243
Score = 141 bits (156), Expect = 2e-28
Identities = 390/584 (67%), Gaps = 33/584 (6%)
Strand=Plus/Minus
Query 25469 ACAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGA 25528
|||| || || ||| | |||||||| ||||| || || |||||| || ||||| |
Sbjct 413197 ACAACGAGATTTGGCAAATGTACAAAAAGGCCGAAGCATCTTTCTGGACTGCGGAAGAAA 413138
Query 25529 TTGATCTGGCCAAGGACATGGACGGCTGGTACG-CTCTATC-----CAAAGACGAGCAGC 25582
|||| || | || ||||| ||| |||| | | || ||| || ||| |
Sbjct 413137 TTGACTTGTCGAAAGACATCAACGACTGGAAGAACAGAATGACTGACAACGA-GAGATTC 413079
Query 25583 ATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATC 25642
| |||| || |||||||| |||||||| || || || || || || || |||||
Sbjct 413078 TTCATCTCCAGA--GTGTTGGCTTTCTTTGCTGCTTCGGACGGAATTGTCAATGAGAACT 413021
Query 25643 TGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCC 25702
|| |||| || | || || ||| | |||||||| ||||||||||| ||||
Sbjct 413020 TGGTGGAGAACTTTTCTGCTGAGGTCCAGATCCCAGAGGCCAAATGTTTCTACGGATTCC 412961
Query 25703 AGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC--TGAT-GACG--TA 25757
|||| || ||||| | ||||| || | | | ||| |||| ||| ||
Sbjct 412960 AGATCATGATGGAAAACATCCACTCGGA-----AACCTACTCTTTGTTGATCGACTCCTA 412906
Query 25758 CATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCA 25813
||| | |||| || | |||| | || |||| | || ||||| |||| ||
Sbjct 412905 CATCAAAGAC----CCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGAAAACATCCCTT 412850
Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA--GAGCGCTACGTT 25871
|||| |||| |||||| ||||||| ||| |||||| ||| | ||| || |||
Sbjct 412849 GCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCG-CAGACGACGAGGCCTT-GTT 412792
Query 25872 TGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGC 25931
|| ||| | |||| |||||||||||||| || || || || ||| || ||||||||
Sbjct 412791 TGCCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGC 412732
Query 25932 GGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGC 25990
| ||||||||| | ||| ||| || ||||| || || ||| || ||||||||
Sbjct 412731 CTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCT-TACGTTCTCCAACGAAT 412673
Query 25991 TCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034
| || |||| ||||| ||| | |||| || ||||||||| ||
Sbjct 412672 TGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCCTGCTTG 412629
>seq13
Length=360411
Score = 129 bits (142), Expect = 1e-24
Identities = 438/676 (65%), Gaps = 10/676 (1%)
Strand=Plus/Minus
Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058
||| | | || | |||||| ||| | || || |||| |||||| | |||||||||
Sbjct 45412 GGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATC 45353
Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118
|| || || | || | |||||||| | || ||| |||| ||| || || |
Sbjct 45352 CAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATG 45293
Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178
|| | || || ||||||||||| ||||| ||||||| || | || | |||||| ||
Sbjct 45292 TCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGC 45233
Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGG 222237
| |||||||||||| || || | ||| | | | | |||||| | || | | ||
Sbjct 45232 CTCTTGTTGCCACCTTGGTCGA-CATAACGTGCTGTGTTGTTGAAAACACGCACCATTGG 45174
Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT 222297
| | ||||| || |||||| || || |||||| || || || | |||
Sbjct 45173 AATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTT 45114
Query 222298 ACTGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356
||| | || || |||||||| || || || || | ||||| |||| | |
Sbjct 45113 -GTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATG 45055
Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416
|||| || || || || ||||| ||||| | | | || |||||||||||||| |
Sbjct 45054 TGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTT 44995
Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476
| | | | || || || || |||| || ||| |||| |||||||| | | |
Sbjct 44994 GGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAGTATCTCTGGG 44935
Query 222477 ACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGC 222536
|||||| || ||| || || | || | | |||| | ||||||||| | ||
Sbjct 44934 ACATCAAATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAA 44875
Query 222537 ATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTG---GAGAGCAGGT 222593
||||||| || | ||| || || | ||| | |||| | || ||||| ||
Sbjct 44874 CTCTCATGATCAAATGCTGTGGTCTTT---CAGCAACCTTCCCGTTGACTCTGAGCAAGT 44818
Query 222594 ACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCA 222653
| ||| |||||| ||||||||| || ||||||||| || || |||||| | | || |
Sbjct 44817 ATGATCTTTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAATCTCTGTCATAGACGA 44758
Query 222654 CGGCGGCGTCCAGCTC 222669
||| | || || |||
Sbjct 44757 TGGCAGAGTTCAACTC 44742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844184640320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |