Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq10 141 2e-28 seq13 129 1e-24 >seq10 Length=432243 Score = 141 bits (156), Expect = 2e-28 Identities = 390/584 (67%), Gaps = 33/584 (6%) Strand=Plus/Minus Query 25469 ACAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGA 25528 |||| || || ||| | |||||||| ||||| || || |||||| || ||||| | Sbjct 413197 ACAACGAGATTTGGCAAATGTACAAAAAGGCCGAAGCATCTTTCTGGACTGCGGAAGAAA 413138 Query 25529 TTGATCTGGCCAAGGACATGGACGGCTGGTACG-CTCTATC-----CAAAGACGAGCAGC 25582 |||| || | || ||||| ||| |||| | | || ||| || ||| | Sbjct 413137 TTGACTTGTCGAAAGACATCAACGACTGGAAGAACAGAATGACTGACAACGA-GAGATTC 413079 Query 25583 ATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATC 25642 | |||| || |||||||| |||||||| || || || || || || || ||||| Sbjct 413078 TTCATCTCCAGA--GTGTTGGCTTTCTTTGCTGCTTCGGACGGAATTGTCAATGAGAACT 413021 Query 25643 TGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCC 25702 || |||| || | || || ||| | |||||||| ||||||||||| |||| Sbjct 413020 TGGTGGAGAACTTTTCTGCTGAGGTCCAGATCCCAGAGGCCAAATGTTTCTACGGATTCC 412961 Query 25703 AGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC--TGAT-GACG--TA 25757 |||| || ||||| | ||||| || | | | ||| |||| ||| || Sbjct 412960 AGATCATGATGGAAAACATCCACTCGGA-----AACCTACTCTTTGTTGATCGACTCCTA 412906 Query 25758 CATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATCGAGCACATACCCA 25813 ||| | |||| || | |||| | || |||| | || ||||| |||| || Sbjct 412905 CATCAAAGAC----CCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGAAAACATCCCTT 412850 Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA--GAGCGCTACGTT 25871 |||| |||| |||||| ||||||| ||| |||||| ||| | ||| || ||| Sbjct 412849 GCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCG-CAGACGACGAGGCCTT-GTT 412792 Query 25872 TGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGC 25931 || ||| | |||| |||||||||||||| || || || || ||| || |||||||| Sbjct 412791 TGCCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGC 412732 Query 25932 GGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGC 25990 | ||||||||| | ||| ||| || ||||| || || ||| || |||||||| Sbjct 412731 CTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCT-TACGTTCTCCAACGAAT 412673 Query 25991 TCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 | || |||| ||||| ||| | |||| || ||||||||| || Sbjct 412672 TGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCCTGCTTG 412629 >seq13 Length=360411 Score = 129 bits (142), Expect = 1e-24 Identities = 438/676 (65%), Gaps = 10/676 (1%) Strand=Plus/Minus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 ||| | | || | |||||| ||| | || || |||| |||||| | ||||||||| Sbjct 45412 GGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATC 45353 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 || || || | || | |||||||| | || ||| |||| ||| || || | Sbjct 45352 CAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATG 45293 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | || || ||||||||||| ||||| ||||||| || | || | |||||| || Sbjct 45292 TCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGC 45233 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGG 222237 | |||||||||||| || || | ||| | | | | |||||| | || | | || Sbjct 45232 CTCTTGTTGCCACCTTGGTCGA-CATAACGTGCTGTGTTGTTGAAAACACGCACCATTGG 45174 Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT 222297 | | ||||| || |||||| || || |||||| || || || | ||| Sbjct 45173 AATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTT 45114 Query 222298 ACTGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 ||| | || || |||||||| || || || || | ||||| |||| | | Sbjct 45113 -GTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATG 45055 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 |||| || || || || ||||| ||||| | | | || |||||||||||||| | Sbjct 45054 TGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTT 44995 Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 | | | | || || || || |||| || ||| |||| |||||||| | | | Sbjct 44994 GGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGTAAAGTATCTCTGGG 44935 Query 222477 ACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGC 222536 |||||| || ||| || || | || | | |||| | ||||||||| | || Sbjct 44934 ACATCAAATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAA 44875 Query 222537 ATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTG---GAGAGCAGGT 222593 ||||||| || | ||| || || | ||| | |||| | || ||||| || Sbjct 44874 CTCTCATGATCAAATGCTGTGGTCTTT---CAGCAACCTTCCCGTTGACTCTGAGCAAGT 44818 Query 222594 ACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCA 222653 | ||| |||||| ||||||||| || ||||||||| || || |||||| | | || | Sbjct 44817 ATGATCTTTCCAAAGTCTTGAAACCGAAGTAGTTGTAGTTGAAATCTCTGTCATAGACGA 44758 Query 222654 CGGCGGCGTCCAGCTC 222669 ||| | || || ||| Sbjct 44757 TGGCAGAGTTCAACTC 44742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844184640320