Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 >seq14 Length=288459 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || || || ||||| ||||| || ||| ||| | || Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| || ||| ||||| |||||| | || || || Sbjct 84101 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84042 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | ||||| || || || |||||||||||| | |||| || |||| || ||| Sbjct 84041 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 83982 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| || ||||| ||| ||||| |||| || ||||| |||| || Sbjct 83981 ATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 83935 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || || || ||||| ||||| || ||| ||| |||| Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| || ||| ||||| |||||| | || || || Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | ||||| || || || ||||||||||| || ||| || | || || ||| Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| || |||||||| ||||| |||| || ||||| |||| || || Sbjct 84665 ATTCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGTAT 84616 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| || || || || ||||| || ||| ||| |||| Sbjct 85074 AATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAATCTTC 85015 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | | ||| || ||| || || |||||| | || || || Sbjct 85014 CGACACTATCGACAACGTTAAGTCCAAGATCCAAGATAAGGAGGGAATTCCTCCTGACCA 84955 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || ||| | || ||||| || || ||||||||||| || ||| || |||| || || Sbjct 84954 GCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAA 84895 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| ||||| || || ||| ||||| |||| || ||||| |||| || || Sbjct 84894 CATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTAT 84844 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || || || ||||| ||||| || ||| ||| | || Sbjct 84389 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84330 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| || ||| ||||| |||||| | || || || Sbjct 84329 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84270 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | ||||| || || || ||||||||||| | |||| || |||| || ||| Sbjct 84269 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84210 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||| || || ||| ||||| |||| || ||||| |||| || || Sbjct 84209 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTAT 84160 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || || || ||||| ||||| || ||| || |||| Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | || ||||| ||||| || ||| | || ||| || Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 84498 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || ||| | ||||| || || || ||||||||||| | |||| || |||| || ||| Sbjct 84497 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84438 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || ||||| || || ||| ||||| |||| || ||||| |||| || || Sbjct 84437 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGTAT 84388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404525215087