Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq28 131 9e-26 >seq28 Length=63775 Score = 131 bits (144), Expect = 9e-26 Identities = 257/373 (69%), Gaps = 8/373 (2%) Strand=Plus/Plus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || ||| ||||||||||| ||||||| ||| | || || ||||||||||||| ||| || Sbjct 54221 CTTCATGAATAAATCTGGGATCCACAAGGCAAAGAACAAGTCTCTCGCTCTCAATTCATC 54280 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 || ||||||||| || || | | || | || || |||||| || || | Sbjct 54281 AGGGCCATGATTCTTTCGAAGTTCAAGCACTTCCATGATGTCCCCGTGCCAAGGCTCGAT 54340 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 || |||||||| || || ||| ||| || ||||| || ||||||||||| | Sbjct 54341 GTAAATAGCAAATGCGCCCGGTCGTTTGTTTCCTCCCTGATCGACATATCTTGCAGTGTT 54400 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTG-TGCTATGAATCT 26168 |||||| ||||||||||||||||||||||| |||| || || | || | | || Sbjct 54401 ATTGAAGACTTTCAACATTGGAACTAATCCGTTTGAGGTGCCATTAGATGACA-GTATAG 54459 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAG-CCCATTTTGAA 26227 ||||| | ||| |||| |||| ||||||| || | ||||| | || || ||| Sbjct 54460 CAGATCCATTACTTCTTATATTGTGAACATGAATTCCCAAACCACCGGAACCTTTCAGAA 54519 Query 26228 --ATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTC 26285 | |||||| || || ||| || | ||| || || | ||| ||| |||| |||| Sbjct 54520 TTAAAGCTGCTGAA--TGTAAC-GTTTTGAAGATCCCATCAATGGAATCTTCTTTTATTC 54576 Query 26286 CTAATAAAAAACA 26298 | | || ||||| Sbjct 54577 CCATCAAGAAACA 54589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039836551975