Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq13 358 8e-94 seq12 82.4 9e-11 >seq13 Length=360411 Score = 358 bits (396), Expect = 8e-94 Identities = 1148/1753 (65%), Gaps = 55/1753 (3%) Strand=Plus/Plus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| |||||| | || ||||| | || || | || || |||||| | |||||||| Sbjct 44847 GAAAGACCACAGCATTTGATCATGAGAGTTGCGGTTGGTATTCACGGGAATGACATTGAA 44906 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324 ||| | || || ||| | ||||||||| || || || | ||||| | ||||| Sbjct 44907 CGTGTGATCGAAACTTACAATTTGATGTCCCAGAGATACTTT-ACTCACGGTTCTCCAAC 44965 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 | | |||||||| ||||| ||||| || || ||||| ||| |||||| | |||| || Sbjct 44966 CTTGTTCAATGCAGGTACCCCAAGCCCCCAAATGTCGTCTTGTTTCCTTGTTGCCATGAA 45025 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 ||| ||||| ||| ||||||| || | || | | | || || ||| || ||| | Sbjct 45026 GGATGACTCCATCGACGGTATTTACGACACATTAAAGACATGCGCTTTAATTTCCAAGAG 45085 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| |||||||| |||||||||| | | ||| | | || ||| || Sbjct 45086 TGCTGGTGGTATTGGTTTGCACATCCACAACATCAGAAGTACTGGCGCTTACATTGCAGG 45145 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || || ||| || | ||||| ||||||||| | || || || ||| |||||| || Sbjct 45146 TACTAACGGTACTTCTAACGGTATCATTCCAATGGTGCGTGTTTTCAACAACACAGCACG 45205 Query 75565 CTATGTAAATCAAGCGGGGCGTC-----GCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 ||||| | |||| | ||| | || ||| | | | ||| | |||||||| || Sbjct 45206 TTATGTCGACCAAG-GTGGCAACAAGAGGCCAGGCG-CTTTTGCGATTTACTTGGAGCCT 45263 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 |||||||| || || | || ||| | || | || ||||| ||| | ||||| | Sbjct 45264 TGGCATGCTGACATTTTCGACTTCATCGACATTAGAAAGAACCACGGTAAGGAAGAAATT 45323 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 | |||||| | || | | || ||||| || || | ||||||||| | ||||| Sbjct 45324 AGAGCCAGAGATTTGTTCCCTGCTCTTTGGATCCCGGATTTGTTCATGAAGAGAGTTGAA 45383 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 | ||| | ||| || | || | |||| | | || || ||| | | || | Sbjct 45384 CAAAACGGTGACTGGACTTTGTTTTCTCCAAATGAAGCTCCTGGTTTGGCTGATGTCTAC 45443 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGG--GTAGAGCCAATGCG 75856 || || ||||||||||| | ||| ||||||||| |||| ||| || || || | Sbjct 45444 GGCGATGAGTTTGAAGCTTTGTACGAAAAGTATGAGAGAGAAGGCCGTGGAAG--ATCC- 45500 Query 75857 ACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || || | || | | | | ||||| | |||| | || | || || ||||| ||||| Sbjct 45501 ACCGT-CAAGGCTCAAAAGCTTTGGTACTCTATCTTGGAAGCGCAAACTGAGACAGGAAC 45559 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 |||| ||| | ||||||||||||||||||||||| | |||||||||||| ||||| | Sbjct 45560 TCCATTCATGTTGTACAAGGATGCTTGTAACAAGAAAACTAACCAAAAGAACTTGGGTAT 45619 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||| || || | || || ||| | |||||| | || || || Sbjct 45620 TATCAAATCATCTAACTTGTGTTGTGAGATTGTCGAGTACTCTTCCCCAGAAGAAGTTGC 45679 Query 76036 TGTTTGCAATTTGGCATCAATCGC----CCTTCCAAAGTATGTCAATGAAGAGACTCGCA 76091 ||| || || ||||| || || || ||||| || || || || | || | Sbjct 45680 TGTCTGTAACTTGGCCTCCATTGCTTTGCCTTCATTCGT-TGAGAAAGATGCATCTAGTT 45738 Query 76092 CTTTTGATTA---TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACC 76148 | | | | ||| || | || || | || ||| ||||||| | ||| | ||| Sbjct 45739 CCTGGTACAACTTTGATAAGTTGCACGAGGTGACCAAGGTTGTTACTAGAAACTTGAACA 45798 Query 76149 GAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACA 76208 || ||||||||||||||||||| || |||||| || ||| || |||||| || ||| Sbjct 45799 GAATCATTGACAGAAATTTTTACCCTGTTGAGGAAGCCAGAAGATCCAATATGAGAAACA 45858 Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT 76268 ||||||||| | | || ||||||||||| || |||| ||| || | | | | | | Sbjct 45859 GACCTATTGCTCTTGGAGTTCAAGGTCTTGCTGATGCATTCATGTCCTTGAGATTGCCTT 45918 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || || | ||||| || ||| |||| || || || || ||||| ||||| || Sbjct 45919 TCGACTCCCAGGAAGCTAAAGAGTTGAACATTCAGATATTCGAGACCATTTATCATGCTG 45978 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | |||| || | || | ||| | | ||||| | |||||||||| ||| |||| Sbjct 45979 CTGTGGAAGCATCTATCGAGCTTGCTCAGGAGGAAGGTCCATATGAGACATATGAAGGTT 46038 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA--A 76446 |||| ||||| | || || | |||| || ||||||| |||| | | | | Sbjct 46039 CTCCTGCGTCAAAGGGATTGTTGCAGTACGACTTGTGGGA--CAGAAAGCCATCCGAGTT 46096 Query 76447 CTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT- 76505 | ||||||||| | | ||| || | | | ||||| | | | ||||| Sbjct 46097 GTGGGACTGGGATACTTTGAAGCAAAATTTGGCCAAACACGGTCTCAG--AAATTCTTTG 46154 Query 76506 -TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 | | || || |||||||||||||| || | |||||||||||||| || ||||||||| Sbjct 46155 CTTGTTGCTCCGATGCCAACAGCCTCTACTTCTCAAATCTTGGGTAACAACGAATGCTTT 46214 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 ||||| |||||| | ||||| ||| |||||| || || || ||||| ||||| Sbjct 46215 GAACCTTACACATCCAACATTTACTCCAGAAGAGTGCTTGCCGGCGAGTTCCAGATTGTT 46274 Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGA--TTGGTCTCTGGTCCAAGGATATGAAG- 76681 ||| ||| | | || ||| | || || | ||| | ||| | |||||||| Sbjct 46275 AACCCACACATGTTGAAGGACTT--AGTTGACTTAGGTATTTGGAATGACAATATGAAGA 46332 Query 76682 --GATCTCATGGTGAA-AGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738 | |||| | || | | || |||||||| | | || || ||||||| || Sbjct 46333 ACAACATCATTGCCAACAAC----GGATCCATTCAGTCTTTACCAAATGTCCCAGACGAA 46388 Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCC 76798 |||||| | | || || |||||||||||| ||| || ||||||||||||| Sbjct 46389 ATCAAGCGTTTATATAAAACCGTGTGGGAAATCTCTCAGAAGCATATCATTGACATGGCT 46448 Query 76799 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGA--ATCTA-TTCATGGAAA 76853 || || | | | || ||||||| ||||| ||| ||| ||| | ||| ||| Sbjct 46449 GCCGACAGAGCTGCGTTTATTGATC--AGTCACAGTCGTTGAACATCCACATCAGAGAA- 46505 Query 76854 GTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAA 76913 || || ||| ||| | |||| ||||| | |||| ||||| |||| | || | Sbjct 46506 --CCTACTATGGGTAAGTTGACTTCCATGCACTTTTACGGATGGAAGAAGGGATTGAAGA 46563 Query 76914 CCGGAATGTACTA 76926 | || |||||||| Sbjct 46564 CGGGTATGTACTA 46576 >seq12 Length=420913 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 27860 GCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCCGT 27919 |||| | || | |||||| || | || || | || | ||||||||| || | | | Sbjct 286785 GCTCCAACACCAATTGTGCAATTCTGTCTCCAGTTTTGATCTCAAAGTCCTTCTTTGAAT 286726 Query 27920 GATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACCAA 27979 | ||||| ||||| | || || || || | ||||| | |||||||||||| ||||| Sbjct 286725 GGTTGAAAAGAACAATCTTCACCTCGCCCCTGTAGTCTGCATCAATAACACCGGCACCTG 286666 Query 27980 CTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCATACACACCAT 28039 | ||| || || || || |||||||| |||| |||||| || | || || ||| Sbjct 286665 TTGAAATTCCGTGTTTGACTGCGAGACCCGATCTTGGTGCTACTCTTCCGTAGGTTCCAA 286606 Query 28040 TTGGCATGAGAATGG 28054 |||| | || ||||| Sbjct 286605 TTGGAACGATAATGG 286591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569204772640