Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq14 140 5e-28
seq1 109 8e-19
>seq14
Length=288459
Score = 140 bits (154), Expect = 5e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||| || ||||| || || || || || |||||||| || ||||
Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||||| ||| |||||| ||||| || ||||| || |||||||| ||
Sbjct 84557 GACACCATTGACAACGTTAAATCTAAAATTCAAGACAAGGAAGGAATTCCTCCAGACCAG 84498
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| | ||||| ||||||||| || || || |
Sbjct 84497 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACA-- 84440
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| ||| | || | || || ||||| ||||| ||||| |||
Sbjct 84439 ACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 84390
Score = 132 bits (146), Expect = 7e-26
Identities = 169/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| ||||||| ||||| || || || || ||||| ||||| ||| |||
Sbjct 85074 AATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAATCTTC 85015
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||||| || || || |||||||| || || || ||||| || ||
Sbjct 85014 CGACACTATCGACAACGTTAAGTCCAAGATCCAAGATAAGGAGGGAATTCCTCCTGACCA 84955
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||||||||||||| ||| |||||||| | ||||| ||||| || || || || |
Sbjct 84954 GCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACA- 84896
Query 156002 TATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| ||| | || | || || ||||| ||||| ||||| |||
Sbjct 84895 -ACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 84846
Score = 104 bits (114), Expect = 3e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||| || ||||| || || || || || |||||||| ||| ||
Sbjct 84389 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84330
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || || || ||||| || || || || || || || ||
Sbjct 84329 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84270
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| | ||||| ||||||||| || || || |
Sbjct 84269 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACA-- 84212
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| ||| | || | || || ||||| ||||| ||||| |||
Sbjct 84211 ACATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 84162
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||| || ||||| || || || || || |||||||| ||| ||
Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || || || ||||| || || || || || || || ||
Sbjct 84101 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84042
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| | |||||| ||||||||| || || || ||
Sbjct 84041 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 83982
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || || | || | || || ||||| ||||| ||||| ||
Sbjct 83981 ATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 83935
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||| || |||||||| || || || || |||||||| ||| |||
Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| || || || || || ||||| || || || || || || || ||
Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | || |||||||| | ||||| ||||| || || || || ||
Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || || | || | || || || || ||||| ||||| |||
Sbjct 84665 ATTCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGGT 84618
>seq1
Length=1779567
Score = 109 bits (120), Expect = 8e-19
Identities = 164/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||| || ||||| || || || ||||| || || |||||| |||
Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || || || || ||||| || ||||| || || || || ||
Sbjct 999538 GACACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAG 999597
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | |||||||||||| | || || |||||| || || || || |
Sbjct 999598 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACA-- 999655
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| ||||||| || | || | || || ||||| ||||| ||||| ||||
Sbjct 999656 ACATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGGTG 999706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871515134800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |