Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq13 136 1e-26
seq1 102 2e-16
seq2 87.8 5e-12
>seq13
Length=360411
Score = 136 bits (150), Expect = 1e-26
Identities = 563/882 (64%), Gaps = 21/882 (2%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || ||||||||||| |||| |||||| ||||| | || || ||||| |||||
Sbjct 45659 GTACTCGACAATCTCACAACACAAGTTAGATGATTTGATAATACCCAAGTTCTTTTGGTT 45600
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| ||| ||||||||||||||||||| | ||| |||| ||||||||||| | || ||
Sbjct 45599 AGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATGGAGTTCCTGTCTCAGTTTGCGC 45540
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATT-AATTTGCTTGTTGTATCTGCCTTCCG 155808
|||| || ||| || | | || || | || | || | | ||||||
Sbjct 45539 TTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGACGGTGGATCTTCCA-CGGCCTTCTC 45481
Query 155809 ACTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG 155866
|||||| |||| || | ||| ||| | || || ||||| |||| || |||||
Sbjct 45480 TCTCATACTTTTCGTACAAAGC-TTC-AAACTCATCGCCGTAGACATCAGCCAAACCAGG 45423
Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT------ACACGCTCCAT 155920
| || || |||||| | ||| | |||| || || | || |||
Sbjct 45422 AGCTTCATTTGGAGAAAACAAAGTCCA------GTCACCGTTTTGTTCAACTCTCTTCAT 45369
Query 155921 AAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC 155980
|| | ||| ||||| |||| ||| | || || || | || || | ||
Sbjct 45368 GAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACC 45309
Query 155981 GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACAT 156040
||| ||||| | | || | ||| || ||| |||| ||| ||||||| || ||
Sbjct 45308 GTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAAT 45249
Query 156041 AGCAAAACTACCATTCCTC---TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAA 156097
|||||| || |||| |||||||| || || ||||| || || || || |||||
Sbjct 45248 CGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAA 45189
Query 156098 GACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACC 156157
|||| | ||| ||||| ||||| || ||||| || || || || ||| | | ||
Sbjct 45188 AACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCC 45129
Query 156158 AGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGC 156217
|| | | || || || || | ||||||||||| | | || |||||| |||
Sbjct 45128 AGTACTTCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGC 45069
Query 156218 GCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATA 156277
|||| ||||| || | | ||||||| || || || ||||| | ||| | | || |
Sbjct 45068 GCATGTCTTTAATGTGTCGTAAATACCGTCGATGGAGTCATCCTTCATGGCAACAAGGAA 45009
Query 156278 GCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAAT 156337
|| || | ||| || | ||| || || || ||||| | || || | | ||| |
Sbjct 45008 ACAAGACGACATTTGGGGGCTTGGGGTACCTGCATTGAACAAGGTTGGAGAACCGTGAGT 44949
Query 156338 AAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTG 156397
||| || | | ||||| ||| ||| || || | | |||| | | ||||||
Sbjct 44948 AAAGTATCTCTGGGACATCAAATTGTAAGTTTCGATCACACGTTCAATGTCATTCCCGTG 44889
Query 156398 AATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457
||||| | | || ||||| || |||||| || | || ||| | || | |
Sbjct 44888 AATACCAACCGCAACTCTCATGATCAAATGCTGTGGTCTTTCAGCAACCTTCCCGTTGAC 44829
Query 156458 TCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| || | ||||| | ||||| ||| || || ||||| ||
Sbjct 44828 TCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAACCGAAGTA 44787
>seq1
Length=1779567
Score = 102 bits (112), Expect = 2e-16
Identities = 117/157 (75%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | || ||| |||||||| || || || |||||||| ||||| |||
Sbjct 1219648 AGAATTTCCTTAAGACGAGGAACACCCAATGTAACATT---CTTGGACGACACACCGGCA 1219592
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
| ||||| ||||||| || | || |||| || ||||| ||| |||||| |||||
Sbjct 1219591 TAATGGAATGTATTCAACGTCATCTGTGTAGCCGGTTCACCGATAGATTGTGCGGCAATA 1219532
Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGACTTCT 301969
| |||||||||||| ||||| ||||| |||||||
Sbjct 1219531 ACACCAACCATTTCACCTGGGTGAACAATCGACTTCT 1219495
>seq2
Length=922268
Score = 87.8 bits (96), Expect = 5e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080
|||| ||| |||| |||||||||||| |||| ||||| | | |||| ||| ||||
Sbjct 594103 CTTTCTTTTCCAATAGCATCAATTTCATCAACAAAAATGATAGCTGGAGCCATTTCTCTC 594044
Query 289081 GCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAAT 289140
|| || || || || || ||||| || || || | ||||||| |||| || |||||
Sbjct 594043 GCTGTTTTGAACAAATCCCTGACACGCGAAGCACCCACACCAACAAACATCTCAACAAAC 593984
Query 289141 TCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGA 289200
|||||| | || || | ||| | ||| || || || || || | || | |
Sbjct 593983 TCAGAACCAGAAACAGACAAGAAAGGAACACCAGCCTCACCAGCAGTAGCTTTAGCTAAA 593924
Query 289201 AGTGTCTTACCTGTTCCAGGTGGTCC 289226
|| ||||||||||| ||||| || ||
Sbjct 593923 AGCGTCTTACCTGTACCAGGAGGACC 593898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816600543861
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |