Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 145 7e-30 seq14 134 1e-26 >seq1 Length=1779567 Score = 145 bits (160), Expect = 7e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| |||| || | || ||||| || ||||| | || || ||| || | Sbjct 999478 ATGCAAATCTTTGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAGGTCGAATCCTCT 999537 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || || Sbjct 999538 GACACCATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAG 999597 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||||||||| || || ||||||| |||| | |||| || || ||| Sbjct 999598 CAAAGATTGATCTTTGCCGGTAAGCAATTGGAGGACGGCAGAACCTTGTCCGACTACAAC 999657 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || ||||||||||| || | |||||||||||| ||||| | || || || Sbjct 999658 ATCCAAAAGGAATCTACCTTGCACTTGGTGTTGAGATTGAGAGGTGGTGG 999707 >seq14 Length=288459 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| | ||||| || || || || | ||||| ||| | || Sbjct 85073 ATGCAAATCTTTGTTAAAACCTTGACCGGCAAGACCATCACATTGGAAGTTGAATCTTCC 85014 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || ||||||||| || || ||||| ||||| || || Sbjct 85013 GACACTATCGACAACGTTAAGTCCAA-GATCCAAGATAAGGAGGGAATTCCTCCTGACCA 84955 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| ||||| || || || |||| || |||| | |||| || || || Sbjct 84954 GCAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAA 84895 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| || || | |||||||||||| ||||| | || || Sbjct 84894 CATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84847 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || | |||||||| || || || | ||||| ||| | || Sbjct 84161 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84102 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || ||||| || || || || Sbjct 84101 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84042 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| || || || || |||| ||| |||| |||| || || ||| Sbjct 84041 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCCGACTACAAC 83982 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || | |||||||||||| ||||| | || || Sbjct 83981 ATTCAGAAGGAATCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 83935 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || | |||||||| || || || | ||||| || | | Sbjct 84617 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAGTCTTCT 84558 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| | ||| || |||||||| |||||||| ||||| || || Sbjct 84557 GACACCATTGACAACGTTAAATCTAAA-ATTCAAGACAAGGAAGGAATTCCTCCAGACCA 84499 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||| || || || || |||| || |||| |||| || || || Sbjct 84498 GCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAA 84439 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| || || | |||||||||||| ||||| | || || Sbjct 84438 CATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84391 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || | |||||||| || || || | ||||| ||| | || Sbjct 84389 ATGCAAATCTTCGTTAAGACTTTGACCGGTAAGACCATCACTTTAGAAGTTGAATCGTCC 84330 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || ||||| || || || || Sbjct 84329 GACACTATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATTCCACCTGACCAG 84270 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| || || || || |||| || |||| |||| || || ||| Sbjct 84269 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCCGACTACAAC 84210 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || | |||||||||||| ||||| | || || Sbjct 84209 ATCCAAAAGGAGTCCACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 84163 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || | || ||||| || || || | ||||| ||| | || Sbjct 84845 ATGCAAATTTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCC 84786 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||||||||| || ||||| || || || || Sbjct 84785 GACACAATTGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGAATCCCACCTGACCAG 84726 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| || || || || |||| || |||| | |||| || || ||| Sbjct 84725 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAAC 84666 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || | |||||||| ||| ||||| | || || Sbjct 84665 ATTCAGAAGGAATCTACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 84619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897301942840