Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq10 104 2e-17
seq14 89.7 5e-13
>seq10
Length=432243
Score = 104 bits (114), Expect = 2e-17
Identities = 344/523 (66%), Gaps = 18/523 (3%)
Strand=Plus/Minus
Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256
|||||||| |||| || || || || | || |||| ||| ||||| |||| |||||
Sbjct 412873 TCAACGCTATCGAAAACATCCCTTGCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGA 412814
Query 50257 CTaaaaacaaaaaa-CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGT 50315
| || | | | | |||| ||||| | || ||||| ||||| || ||||||
Sbjct 412813 TCGCAGACGACGAGGCCTTGTTTG-CCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGT 412755
Query 50316 GTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCC 50375
| || || || || ||||| | || || | | || | ||| | |||||
Sbjct 412754 ATTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCT 412695
Query 50376 GGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCG 50435
|| || ||||| |||||| ||||||| | |||||||| ||||||| ||||||||
Sbjct 412694 GGTCTTACGTTCTCCAACGAATTGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCC 412635
Query 50436 TGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATG 50495
|| |||| | | | | | | || | | | || || | | || |||| | |
Sbjct 412634 TGCTTGTTGTTCTCT---CACTTGAACAACAGAC---CAAACCCAGCTATCGTGGAGAAG 412581
Query 50496 TTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCA 50552
| | || |||||| || |||||||| | || || || || || || |
Sbjct 412580 ATTATTACTGAGGCCGTCACTATTGAAAAAGAATACTTTACCGATGCCTTGCCAGCAAGC 412521
Query 50553 TTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG 50612
|||||||| |||||| ||| |||||||| | ||| | ||||| ||||| || ||||||
Sbjct 412520 TTGTTGGGAATGAACTGTGACTTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTG 412461
Query 50613 -TTGTTGCAGCTGGGACAACC-GAAATACTATAATG-CACGTAACCCCTTTCCGTTTATG 50669
|||| || || || ||| ||| || |||| ||| ||||| || ||||||
Sbjct 412460 CTTGTGGC--CTTGGGTAACAAGAAGGTTTACAATGTCACC-AACCCATTCGACTTTATG 412404
Query 50670 AATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGA 50711
| ||||| || |||| || || || ||||||||||| ||||
Sbjct 412403 GAGAACATTTCCTTGGCAGGAAAGACCAACTTTTTCGAGAAGA 412361
>seq14
Length=288459
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | ||| || || || | || || || ||||| |||||||| ||| |
Sbjct 84847 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84906
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || |||||| | ||| ||||||||| | |||| | |||||| || |||||
Sbjct 84907 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGA 84966
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| || || || || || || || | | || | ||||| | | ||| |||
Sbjct 84967 ATTCCCTCCTTATCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACT 85026
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | || | |||||||||||||| ||||| || || ||||||||
Sbjct 85027 TCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543676339600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |