Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq10 104 2e-17 seq14 89.7 5e-13 >seq10 Length=432243 Score = 104 bits (114), Expect = 2e-17 Identities = 344/523 (66%), Gaps = 18/523 (3%) Strand=Plus/Minus Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256 |||||||| |||| || || || || | || |||| ||| ||||| |||| ||||| Sbjct 412873 TCAACGCTATCGAAAACATCCCTTGCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGA 412814 Query 50257 CTaaaaacaaaaaa-CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGT 50315 | || | | | | |||| ||||| | || ||||| ||||| || |||||| Sbjct 412813 TCGCAGACGACGAGGCCTTGTTTG-CCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGT 412755 Query 50316 GTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCC 50375 | || || || || ||||| | || || | | || | ||| | ||||| Sbjct 412754 ATTTTCTTCTCTGGCTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCT 412695 Query 50376 GGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCG 50435 || || ||||| |||||| ||||||| | |||||||| ||||||| |||||||| Sbjct 412694 GGTCTTACGTTCTCCAACGAATTGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCC 412635 Query 50436 TGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACATG 50495 || |||| | | | | | | || | | | || || | | || |||| | | Sbjct 412634 TGCTTGTTGTTCTCT---CACTTGAACAACAGAC---CAAACCCAGCTATCGTGGAGAAG 412581 Query 50496 TTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCA 50552 | | || |||||| || |||||||| | || || || || || || | Sbjct 412580 ATTATTACTGAGGCCGTCACTATTGAAAAAGAATACTTTACCGATGCCTTGCCAGCAAGC 412521 Query 50553 TTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG 50612 |||||||| |||||| ||| |||||||| | ||| | ||||| ||||| || |||||| Sbjct 412520 TTGTTGGGAATGAACTGTGACTTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTG 412461 Query 50613 -TTGTTGCAGCTGGGACAACC-GAAATACTATAATG-CACGTAACCCCTTTCCGTTTATG 50669 |||| || || || ||| ||| || |||| ||| ||||| || |||||| Sbjct 412460 CTTGTGGC--CTTGGGTAACAAGAAGGTTTACAATGTCACC-AACCCATTCGACTTTATG 412404 Query 50670 AATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGA 50711 | ||||| || |||| || || || ||||||||||| |||| Sbjct 412403 GAGAACATTTCCTTGGCAGGAAAGACCAACTTTTTCGAGAAGA 412361 >seq14 Length=288459 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || | ||| || || || | || || || ||||| |||||||| ||| | Sbjct 84847 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84906 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || |||||| | ||| ||||||||| | |||| | |||||| || ||||| Sbjct 84907 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGA 84966 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || || || || || || | | || | ||||| | | ||| ||| Sbjct 84967 ATTCCCTCCTTATCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACT 85026 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | |||||||||||||| ||||| || || |||||||| Sbjct 85027 TCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543676339600