Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq28 167 6e-36
seq1 111 4e-19
seq10 95.1 3e-14
>seq28
Length=63775
Score = 167 bits (184), Expect = 6e-36
Identities = 327/474 (69%), Gaps = 11/474 (2%)
Strand=Plus/Minus
Query 110676 TCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAA 110735
|||| ||| | ||||||||||| | ||||||||| ||||||||| |||||| ||||
Sbjct 54436 TCAAACGGATTAGTTCCAATGTTGAAAGTCTTCAATAACACTGCAAGATATGTCGATCAG 54377
Query 110736 GGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATA 110792
|| || || | || ||| |||||||||| || |||| |||||||| || ||
Sbjct 54376 GGAGGAAACAAACGACCGGGCGCATTTGCTATTTACATCGAGCCTTGGCACGGGGACATC 54317
Query 110793 TTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTA 110852
| ||| | | |||||||| || ||||| || ||| ||| ||||| | || ||
Sbjct 54316 ATGGAAGTGCTTGAACTTCGAAAGAATCATGGCCCTGATGAATTGAGAGCGAGAGACTTG 54257
Query 110853 TTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGG 110912
|| | ||| ||||||| |||||||||||||||| || || || | || || | ||||
Sbjct 54256 TTCTTTGCCTTGTGGATCCCAGATTTATTCATGAAGCGGGTGAAAAATAACGGAAAGTGG 54197
Query 110913 TCTCTTATGTGTCCTCA--TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTG 110970
| |||| | ||| || | |||||||| || || || |||||| | || || |
Sbjct 54196 AGT-TTAT-TTTCCCCAAGTAAAGCTCCTGGTTTAAGCGACGTCTATGGAGAGGAATTCG 54139
Query 110971 AAGACCTTTACGAAAAATATGAAAAAGAAG-GCAAGTTTCGCAAACAAATTCCAGCTCAA 111029
| ||||| |||||||||| |||||| | | || ||| | ||| ||| |
Sbjct 54138 AGAGTCTTTATCAAAAATATGAGGAAGAAGATCTTGCTT-GCACAACCATTGAAGCAAGA 54080
Query 111030 GAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTAT 111089
|| | ||| | | || ||| | | ||| || ||||||| || | ||| | |||
Sbjct 54079 AAATTGTGGATGCATATTCTTCAGGCGCAAACAGAGACTGGAATGCCATTTATGCTTTAT 54020
Query 111090 AAAGA-TCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTC 111142
||||| ||| |||||| ||| ||||||||||||||||| || || |||||
Sbjct 54019 AAAGACGCAT-GTAATCGGAAACTGAATCAAATGAATTTAGGGACTATAAAGTC 53967
>seq1
Length=1779567
Score = 111 bits (122), Expect = 4e-19
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395
||||| | || || || |||| || ||||||||||||||||||| ||||||||| ||
Sbjct 1217661 TTCAACCGTCAGCCCTCCTTGCACAAGATGTCTATGATGGCTCATAGAGTCAAAGT--TA 1217718
Query 305396 T-CTGGATTG-ACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTG 305453
| | | | | |||||| |||| ||| | || |||| || ||||| ||||| |
Sbjct 1217719 TGCCGTACTCCACATTTAGATTGAATTTGTCTGTCACATCGCCATACAATGCAGATTTCG 1217778
Query 305454 ATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACAATGACTGAATTATCAG 305513
|||| ||||||||||| ||||||| || ||||| ||| |||| ||||||| ||
Sbjct 1217779 ATGGTGATGAAATGAACTTGCATGTTCCACAATCGCAGGAGACAAGAGCTGAATTGTCCC 1217838
Query 305514 AAATATGTTCTGTATCAAAACTTATCATTTCTCC 305547
|||| ||| |||| || | ||| |||||||
Sbjct 1217839 AAATTTGTGCTGTTCCATTGCAGATCGTTTCTCC 1217872
>seq10
Length=432243
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCT 131854
||||| ||||| || || ||||| | | |||||| ||| || || ||| |
Sbjct 412847 ATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGACGACGAGGCCTTGTTTGCC 412788
Query 131855 ACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCT 131914
|||| | || || |||||| ||| |||||||| ||||| || || | || ||
Sbjct 412787 GAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGCCTCT 412728
Query 131915 ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATC 131974
||||| ||| | |||||| | || ||||||||||| || | || ||||| |||| ||
Sbjct 412727 ATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTCCAACGAATTGATT 412668
Query 131975 TCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
| ||||| |||| ||||| ||||| |||||
Sbjct 412667 TGCAGAGACGAAGGTTTGCACACTGACTTTGC 412636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186811994079933
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |