Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq28 167 6e-36 seq1 111 4e-19 seq10 95.1 3e-14 >seq28 Length=63775 Score = 167 bits (184), Expect = 6e-36 Identities = 327/474 (69%), Gaps = 11/474 (2%) Strand=Plus/Minus Query 110676 TCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAA 110735 |||| ||| | ||||||||||| | ||||||||| ||||||||| |||||| |||| Sbjct 54436 TCAAACGGATTAGTTCCAATGTTGAAAGTCTTCAATAACACTGCAAGATATGTCGATCAG 54377 Query 110736 GGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATA 110792 || || || | || ||| |||||||||| || |||| |||||||| || || Sbjct 54376 GGAGGAAACAAACGACCGGGCGCATTTGCTATTTACATCGAGCCTTGGCACGGGGACATC 54317 Query 110793 TTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTA 110852 | ||| | | |||||||| || ||||| || ||| ||| ||||| | || || Sbjct 54316 ATGGAAGTGCTTGAACTTCGAAAGAATCATGGCCCTGATGAATTGAGAGCGAGAGACTTG 54257 Query 110853 TTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGG 110912 || | ||| ||||||| |||||||||||||||| || || || | || || | |||| Sbjct 54256 TTCTTTGCCTTGTGGATCCCAGATTTATTCATGAAGCGGGTGAAAAATAACGGAAAGTGG 54197 Query 110913 TCTCTTATGTGTCCTCA--TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTG 110970 | |||| | ||| || | |||||||| || || || |||||| | || || | Sbjct 54196 AGT-TTAT-TTTCCCCAAGTAAAGCTCCTGGTTTAAGCGACGTCTATGGAGAGGAATTCG 54139 Query 110971 AAGACCTTTACGAAAAATATGAAAAAGAAG-GCAAGTTTCGCAAACAAATTCCAGCTCAA 111029 | ||||| |||||||||| |||||| | | || ||| | ||| ||| | Sbjct 54138 AGAGTCTTTATCAAAAATATGAGGAAGAAGATCTTGCTT-GCACAACCATTGAAGCAAGA 54080 Query 111030 GAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTAT 111089 || | ||| | | || ||| | | ||| || ||||||| || | ||| | ||| Sbjct 54079 AAATTGTGGATGCATATTCTTCAGGCGCAAACAGAGACTGGAATGCCATTTATGCTTTAT 54020 Query 111090 AAAGA-TCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTC 111142 ||||| ||| |||||| ||| ||||||||||||||||| || || ||||| Sbjct 54019 AAAGACGCAT-GTAATCGGAAACTGAATCAAATGAATTTAGGGACTATAAAGTC 53967 >seq1 Length=1779567 Score = 111 bits (122), Expect = 4e-19 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 ||||| | || || || |||| || ||||||||||||||||||| ||||||||| || Sbjct 1217661 TTCAACCGTCAGCCCTCCTTGCACAAGATGTCTATGATGGCTCATAGAGTCAAAGT--TA 1217718 Query 305396 T-CTGGATTG-ACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTG 305453 | | | | | |||||| |||| ||| | || |||| || ||||| ||||| | Sbjct 1217719 TGCCGTACTCCACATTTAGATTGAATTTGTCTGTCACATCGCCATACAATGCAGATTTCG 1217778 Query 305454 ATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTACAATGACTGAATTATCAG 305513 |||| ||||||||||| ||||||| || ||||| ||| |||| ||||||| || Sbjct 1217779 ATGGTGATGAAATGAACTTGCATGTTCCACAATCGCAGGAGACAAGAGCTGAATTGTCCC 1217838 Query 305514 AAATATGTTCTGTATCAAAACTTATCATTTCTCC 305547 |||| ||| |||| || | ||| ||||||| Sbjct 1217839 AAATTTGTGCTGTTCCATTGCAGATCGTTTCTCC 1217872 >seq10 Length=432243 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131795 ATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCT 131854 ||||| ||||| || || ||||| | | |||||| ||| || || ||| | Sbjct 412847 ATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGACGACGAGGCCTTGTTTGCC 412788 Query 131855 ACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCT 131914 |||| | || || |||||| ||| |||||||| ||||| || || | || || Sbjct 412787 GAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGGCTCGTTTGCCTCT 412728 Query 131915 ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATC 131974 ||||| ||| | |||||| | || ||||||||||| || | || ||||| |||| || Sbjct 412727 ATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTCCAACGAATTGATT 412668 Query 131975 TCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 | ||||| |||| ||||| ||||| ||||| Sbjct 412667 TGCAGAGACGAAGGTTTGCACACTGACTTTGC 412636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811994079933