Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq14 120 2e-22
seq1 116 2e-21
>seq14
Length=288459
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || | |||| ||| ||||| |||||||| |||||
Sbjct 84390 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGA 84449
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || || || ||||| | ||||| ||| | ||
Sbjct 84450 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGG 84509
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| |||||| | || ||| | ||| | |||||| || || |
Sbjct 84510 AATTCCTTCCTTGTCTTGAATTTT-AGATTTAACGTTGTCAATGGTGTCAGAAGACTCAA 84568
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || || || || || ||||| ||||||
Sbjct 84569 CTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATA 84618
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || | |||| ||| ||||| |||||||| |||||
Sbjct 84846 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGA 84905
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || ||||||||||| | ||||| || | ||
Sbjct 84906 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGG 84965
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || || || || || | | ||| | ||| | |||||| ||||| |
Sbjct 84966 AATTCCCTCCTTATCTTGGATCTT-GGACTTAACGTTGTCGATAGTGTCGGAAGATTCAA 85024
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || || ||||| |||||||| |||||
Sbjct 85025 CTTCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | |||||||| || | |||| ||| ||||| |||||||| |||||
Sbjct 84162 ACCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGA 84221
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | |||| |||||||| || || || || ||||| | ||||| || | ||
Sbjct 84222 CAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 84281
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || | | ||||| ||| | |||||| ||||| |
Sbjct 84282 AATTCCCTCCTTGTCTTGGATCTT-GGACTTAACATTGTCGATAGTGTCGGACGATTCAA 84340
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || ||||| || || || || || ||||| ||||||
Sbjct 84341 CTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATA 84390
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||||||| | |||||||| || | |||| || || || |||||||| |||||
Sbjct 83935 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCGGAC 83994
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || | | || |||||||| || || || || ||||| | ||||| || | ||
Sbjct 83995 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 84054
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || | | ||||| ||| | |||||| ||||| ||
Sbjct 84055 ATTCCCTCCTTGTCTTGGATCTT-GGACTTAACATTGTCGATAGTGTCGGACGATTCAAC 84113
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || ||||| || || || || || ||||| ||||||
Sbjct 84114 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATA 84162
>seq1
Length=1779567
Score = 116 bits (128), Expect = 2e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | |||||||| || | || || ||||| |||||||| ||||
Sbjct 999706 CACCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGG 999647
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | |||| |||||||| || |||||||| ||||| | ||||| || | |
Sbjct 999646 ACAAGGTTCTGCCGTCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTG 999587
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | ||||| ||| | |||||| |||||
Sbjct 999586 GAATACCTTCCTTGTCTTGGATCTT-GGACTTAACATTGTCGATGGTGTCAGAGGATTCG 999528
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | || || || |||||||| || || || |||||||| ||||||
Sbjct 999527 ACCTCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAACAAAGATTTGCATA 999477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703787677760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |