Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq14 147 2e-30 seq1 141 8e-29 >seq14 Length=288459 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || || || ||||||||| |||||||| |||| | Sbjct 84847 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84906 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| |||| |||||||| ||||| ||||| | |||||||| | |||| Sbjct 84907 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGA 84966 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| || |||||| ||| | |||| | | |||||| ||||| || Sbjct 84967 ATTCCCTCCTTATCTTGGATCTTGGACTT-AACGTTGTCGATAGTGTCGGAAGATTCAAC 85025 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGT 35741 |||| ||||| || || || ||||| ||||| ||||| || |||||| ||| Sbjct 85026 TTCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCATTATGT 85078 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || || || ||||||||| |||||||| |||| | Sbjct 84163 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84222 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| |||| |||| |||||||| || || ||||| | |||||||| | ||| Sbjct 84223 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 84282 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | | | | |||||| |||||| || Sbjct 84283 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAACT 84342 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| |||||||| || || || || ||||| Sbjct 84343 TCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389 Score = 132 bits (146), Expect = 4e-26 Identities = 171/235 (73%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 35503 TTTA-TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||| |||||||| | || ||||||||||| || || || ||||| |||||||||| Sbjct 83927 TTTAGTTTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGT 83986 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 | |||| ||| |||| | || |||| |||||||| || || ||||| | ||||||| Sbjct 83987 AGTCGGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGT 84046 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCG 35681 | | |||| | ||||||||| |||||| ||| | | | | | |||||| || Sbjct 84047 CAGGTGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACG 84106 Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || | ||||| || ||||| |||||||| || || || || ||||| Sbjct 84107 ATTCAACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| ||||| || || ||| ||||| ||||||||||| || | | Sbjct 84619 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGAC 84678 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| |||| |||||||| || || ||||| | |||||||| | || Sbjct 84679 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 84738 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | | | | |||||| ||||| || Sbjct 84739 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACT 84798 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| |||||||| || || || || ||||| Sbjct 84799 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||||||||| || || || ||||||||| |||||||| |||| | Sbjct 84391 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84450 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| |||| |||| |||||||| || || ||||| | |||||||| | |||| Sbjct 84451 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGGA 84510 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||| | ||| ||| | || | |||| | | ||||| || || || Sbjct 84511 ATTCCTTCCTTGT-CTTGAATTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAAC 84569 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| |||||||| || || || || ||||| Sbjct 84570 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617 >seq1 Length=1779567 Score = 141 bits (156), Expect = 8e-29 Identities = 177/241 (73%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 |||||| || ||||||| | || ||||||||||| || || ||| |||||||| | Sbjct 999717 TCTCTTC-TTACCACCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGA 999659 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| |||| |||||||| |||| |||| |||||||| ||||| ||||| | | Sbjct 999658 TGTTGTAGTCGGACAAGGTTCTGCCGTCCTCCAATTGCTTACCGGCAAAGATCAATCTTT 999599 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 ||||||| | |||| | |||||||| |||||| ||| | | | | | |||| Sbjct 999598 GCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATGGTGT 999539 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | ||||| ||||||| || || || ||||| |||||||| || ||||| || |||| Sbjct 999538 CAGAGGATTCGACCTCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAACAAAGATTTGCA 999479 Query 35736 T 35736 | Sbjct 999478 T 999478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793301349240