Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq14 140 3e-28
seq1 120 3e-22
>seq14
Length=288459
Score = 140 bits (154), Expect = 3e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
||||| ||||| | || |||||| | ||| | ||||||||||| |||||||||||||||
Sbjct 83932 TTTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCG 83991
Query 134544 C-CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
||| | | || | || || | || || || || || ||||| | ||||| || ||
Sbjct 83992 GACAAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGG 84050
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| || || || || ||||| || || || || ||| | ||||||||||||||
Sbjct 84051 TGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTC 84110
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | ||| ||||| |||||||| ||||| |||||||| ||||||||
Sbjct 84111 AACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84161
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||| | ||||| |||||||| |||||||||||| |
Sbjct 84391 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84450
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | || || || || || ||||| | ||||| || || ||
Sbjct 84451 AAAGTTCTGCC-GTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGAGG 84509
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||||||||| ||| || ||| | ||||| || || || ||
Sbjct 84510 AATTCCTTCCTTGTCTTGAATTTTAGATTTAACGTTGTCAATGGTGTCAGAAGACTCAAC 84569
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| |||||||| ||||| |||||||| ||||||||
Sbjct 84570 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84617
Score = 129 bits (142), Expect = 6e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || |||||| | ||| | ||||| |||||||| |||||||||||| |
Sbjct 84163 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84222
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | || || || || || ||||| | ||||| || || ||
Sbjct 84223 AAAGTTCTGCC-GTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 84281
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| || || || || ||| | |||||||||||||| ||
Sbjct 84282 AATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAAC 84341
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| |||||||| ||||| |||||||| ||||||||
Sbjct 84342 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCAT 84389
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | || |||||||| |||||||||||||| | |
Sbjct 84619 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGAC 84678
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| | ||| || | || || || || || ||||| | ||||| || || ||
Sbjct 84679 AA-GGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 84737
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || || || ||||| || || || || ||| | ||||||||| ||||| ||
Sbjct 84738 GATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAAC 84797
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| ||||| ||||| || ||||| |||||||||||||||||
Sbjct 84798 TTCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCAT 84845
Score = 125 bits (138), Expect = 7e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || |||||| | ||| | ||||| |||||||| ||||||||||||
Sbjct 84847 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84906
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || | || || || ||||||||||| | ||||| || || ||
Sbjct 84907 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGA 84966
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||| || || || || ||| | |||||||| ||||| ||
Sbjct 84967 ATTCCCTCCTTATCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACT 85026
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718
|| | || ||||| || ||||| || |||||||| || ||||||||| |||
Sbjct 85027 TCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCATTATGT 85078
>seq1
Length=1779567
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | ||| | || ||||||||||| ||||||||||| | |
Sbjct 999704 CCACCTCTCAATCTCAACACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 999645
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | || || || ||||| ||||| | ||||| || || ||
Sbjct 999644 AAGGTTCTG-CCGTCCTCCAATTGCTTACCGGCAAAGATCAATCTTTGCTGGTCAGGTGG 999586
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || || || ||| | ||||| || ||||| ||
Sbjct 999585 AATACCTTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATGGTGTCAGAGGATTCGAC 999526
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | |||||||| ||||| || ||||| ||||| || ||||||||
Sbjct 999525 CTCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAACAAAGATTTGCAT 999478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398065173560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |