Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq13 257 2e-63 seq10 230 3e-55 seq28 104 3e-17 >seq13 Length=360411 Score = 257 bits (284), Expect = 2e-63 Identities = 1164/1833 (64%), Gaps = 53/1833 (3%) Strand=Plus/Minus Query 68413 TAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTG 68472 ||||||||||| || |||| || |||||||||| || ||||| || | || Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 68473 GAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCT 68532 | | || || || || || |||| ||| || ||||| || || || || Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACTGATCAATAAACGCAGCT 46457 Query 68533 CTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATC 68592 || || || ||||| | || ||| ||| |||| |||||||| | || ||| | | Sbjct 46456 CTGTCGGCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATATAAA 46397 Query 68593 TGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATCGGATATAATT 68649 | ||||| || ||||| | | | | ||||||||||| | || || || Sbjct 46396 CGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTGTTGGCAATGATG 46337 Query 68650 ATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA--AACTC--TAAGGAGATG 68705 | ||||| || | |||||||| | | || || || || || | | | || Sbjct 46336 TTGTTCTTCATATTGTCATTCCAAA----TACCTAAGTCAACTAAGTCCTTCAACATGTG 46281 Query 68706 CGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATA 68765 || ||||| || || || || || | | |||||| | | |||||| || || || Sbjct 46280 TGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATGTGTA 46221 Query 68766 TGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGC 68825 ||||| | |||| || || |||| ||||||| ||| || || |||||||| || || Sbjct 46220 AGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCGGAGC 46161 Query 68826 CACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATC 68885 || | ||| |||||| ||||| ||| | | || | || | | | ||| || Sbjct 46160 AACAAGCAAAGAATTTCTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATCCCAGTC 46101 Query 68886 CCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATA 68945 ||| | || ||||| | ||| | ||||| || | | ||| || ||| Sbjct 46100 CCACAACTCGGATGGCTTTCTGTCCCACAAGTCGTACTGCAACAATCCCTTTGACGCAGG 46041 Query 68946 TGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAA 69005 || || | |||||| ||||| || ||||||| | ||| || || | ||| || | Sbjct 46040 AGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGATGCTTCCAC 45981 Query 69006 TGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATC 69065 ||| | | |||||| || ||||| |||| | || | |||| ||||| | || Sbjct 45980 AGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTCCTGGGAGTC 45921 Query 69066 GAATGGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAG 69124 ||| || ||| | || || || |||||||| || | || ||||| |||| | | |||| Sbjct 45920 GAAAGGC-AATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAGAGCAATAG 45862 Query 69125 GTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 69184 |||| | |||| |||| || ||| ||||| || ||| ||| |||| | || || | Sbjct 45861 GTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCTGTCAATGA 45802 Query 69185 TTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC----- 69239 || | || | |||| || || || ||| || | | || ||| | Sbjct 45801 TTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAAGTTGTACC 45742 Query 69240 ---AAATCG-TCCATCTAT---AACAAACATATTCAGTGCTACAGATGCTAGATTACAAA 69292 || | | | ||||| | ||| || | || || | || || | ||||| | Sbjct 45741 AGGAACTAGATGCATCTTTCTCAACGAATGAAGGCAAAGCAATGGAGGCCAAGTTACAGA 45682 Query 69293 CTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGA 69352 | || || || | | | || | | ||||| ||| | ||| |||||| Sbjct 45681 CAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAGATGATTTGA 45622 Query 69353 TAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACG 69412 || | |||| || | || ||| | || |||||||| || |||||||| | || || | Sbjct 45621 TAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACAACATGAATG 45562 Query 69413 GAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTA 69472 |||| || || ||| | || | ||| | ||||| | ||||| ||| || | Sbjct 45561 GAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAGCCTTGACGG 45502 Query 69473 CGG-TCTTGTAACGCTTCTCTTTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTC 69529 || |||| | || | ||| | ||||| | | ||| | ||| ||| || ||||| | Sbjct 45501 TGGATCTTCCACGGCCT-TCTCTCTCATACTTTTCGTACAAAGC--TTCAAACTCATCGC 45445 Query 69530 CCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCAT 69589 | | |||||| |||| |||||| |||||||||| | | ||| | ||| || | | | Sbjct 45444 CGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTT 45385 Query 69590 CCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTC 69649 | ||||| ||||| || | ||| || ||||||||||| || | |||||||| || Sbjct 45384 GTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTC 45325 Query 69650 TATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCC 69709 || ||||||| || || || ||| ||| |||| || || | ||| |||| ||||| Sbjct 45324 TAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCC 45265 Query 69710 ATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATC 69769 | || || | || ||||| | | || || | || || || || || || | || | Sbjct 45264 AAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAAC 45205 Query 69770 TGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTC 69829 || ||||| || | || | || ||| ||||| ||||| ||||| |||| || || | Sbjct 45204 GTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACCGTTAGTAC 45145 Query 69830 CAGAAATATAACTTCCTCTTGCGCGAATATTACTAA-----TAGAT----AGACCTATTC 69880 | | ||| ||| |||| | || | || | | ||| | ||| || | Sbjct 45144 CTGCAATGTAA---------GCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATAC 45094 Query 69881 CTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGC 69940 | || || | || || |||| ||| || || |||||||| || ||||| || ||| Sbjct 45093 CACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGG 45034 Query 69941 TATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000 ||||| ||||| || ||| ||||| |||||||| | | || || |||| Sbjct 45033 AGTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCAT 44974 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 | || || || ||||| ||||||| || || | | || | || |||||| ||||| | Sbjct 44973 TGAACAAGGTTGGAGAACCGTGAGTAAAGTATCTCTGGGACATCAAATTGTAAGTTTCGA 44914 Query 70061 TAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAG 70120 | | ||| || || | ||||| || | ||| || | ||| | || |||||| | Sbjct 44913 TCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTG 44854 Query 70121 GTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACC 70180 ||| ||| | || || | | | | || ||||||| |||||| ||| || || | Sbjct 44853 GTCTTTCAGCAACCTTCCCGTTGACTCTGAGCAAGTATGATCTTTCCAAAGTCTTGAAAC 44794 Query 70181 CAAAATAGTTGTA--TGAAAAGTCTCTTTCGTA 70211 | || |||||||| ||||| ||||| || || Sbjct 44793 CGAAGTAGTTGTAGTTGAAA--TCTCTGTCATA 44763 >seq10 Length=432243 Score = 230 bits (254), Expect = 3e-55 Identities = 582/878 (66%), Gaps = 24/878 (3%) Strand=Plus/Plus Query 39308 TGTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTG 39367 |||| ||| || || || ||||| || ||| | ||||||||||| || || || Sbjct 412324 TGTGCCATGACACCAGCCTTCTGGTAGTCCGAAACTCTCTTCTCGAAAAAGTTGGTCTTT 412383 Query 39368 CCTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAt---tttttt 39424 ||| |||| || || || ||||| || || || || || || |||| || || || Sbjct 412384 CCTGCCAAGGAAATGTTCTCCATAAAGTCGAATGGGTTGGTGACATTGTAAACCTTCTTG 412443 Query 39425 ttAAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATT 39484 ||| || || | || ||||||||| ||||| || || | |||| ||||| Sbjct 412444 TTA---CCCAAGGCCACAAGCAATCTATCGGCAACGAACTCGACGTATTGGCACATCAAG 412500 Query 39485 TCACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATG 39544 ||||| |||||||| | | | |||| | || || || | | |||||||| || Sbjct 412501 TCACAGTTCATTCCCAACAAGCTTGCTGGCAAGGCATCGGTAAAGTATTCTTTTTCAATA 412560 Query 39545 TCTACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGT---GGATGCAAT--A 39599 |||||||| || || ||| | || | || || ||| | || | | Sbjct 412561 GTGACGGCCTCAGTAATAATC-----TTCTCCACGATAGCTGGGTTTGGTCTGTTGTTCA 412615 Query 39600 AATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATT 39659 | || |||| |||||||| |||||| || | || || ||||| | ||| |||| Sbjct 412616 AGTGAGAGAACAACAAGCAGGCAAAGTCAGTGTGCAAACCTTCGTCTCTGCAAATCAATT 412675 Query 39660 CGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAA 39719 |||| || || || || |||||||| | ||| | ||| || | ||| || || | |||| Sbjct 412676 CGTTGGAGAACGTAAGACCAGGCATCAAACCTCTCTTCTTCAACCAGAAGATAGAGGCAA 412735 Query 39720 AAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC 39779 | || ||||| ||||| || ||||| || || ||||| || || | ||| || | | Sbjct 412736 ACGAGCCAGAGAAGAAAATACCTTCGACAGCAGCAAAGGCCACCAATCTTTCGGCAAACA 412795 Query 39780 TTGTATCATTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA 39836 | || | | | ||||| || ||||| || || |||||||| | ||||| | Sbjct 412796 AGGCCTCGTCGTCTGCGATCCATCTCAAGGCCCACTCGGCCTTCTTCTTAATGCAAGGGA 412855 Query 39837 TTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTA 39896 | |||| ||||| || || | | | | || | | ||||| | || | || | Sbjct 412856 TGTTTTCGATAGCGTTGAACAAAAAGTCAGCCTCTTTAGGGTCTTTGATGTAGGAGTCGA 412915 Query 39897 TTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAAC 39956 | |||| | || |||| || ||||||||||| ||| ||||| |||||||| |||| Sbjct 412916 TCAACAAAGAGTAGGTTTCCGAGTGGATGTTTTCCATCATGATCTGGAATCCGTAGAAAC 412975 Query 39957 ATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTA 40016 || | || || | || || ||||| | | |||| | ||| |||| || ||||| || | Sbjct 412976 ATTTGGCCTCTGGGATCTGGACCTCAGCAGAAAAGTTCTCCACCAAGTTCTCATTGACAA 413035 Query 40017 TTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTA-ATAAAATATTTTTCATCGGGT 40075 |||| || ||| ||||| || ||||| || | | | || || || | || | | Sbjct 413036 TTCCGTCCGAAGCAGCAAAGAAAGCCAACAC-TCTGGAGATGAAGAATCTCTCGTTGTCA 413094 Query 40076 GTCAAT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 40132 |||| | || |||||||| ||||| ||||| || | || | |||||| || ||||| Sbjct 413095 GTCATTCTGTTCTTCCAGTCGTTGATGTCTTTCGACAAGTCAATTTCTTCCGCAGTCCAG 413154 Query 40133 AACGACGCCTCTGCCTTTTTGTACATGTTCCATATATC 40170 || || || || |||||||||||||| | ||| || || Sbjct 413155 AAAGATGCTTCGGCCTTTTTGTACATTTGCCAAATCTC 413192 >seq28 Length=63775 Score = 104 bits (114), Expect = 3e-17 Identities = 226/336 (67%), Gaps = 2/336 (1%) Strand=Plus/Plus Query 69490 TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCA 69549 |||| ||||||| | ||| || | |||||||| ||||| | || || || ||| Sbjct 54111 TCTTCCTCATATTTTTGATAAAGACTCTCGAATTCCTCTCCATAGACGTCGCTTAAACCA 54170 Query 69550 GGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAAT 69609 ||| || | |||| | | || |||| | | || || || || ||||| ||| Sbjct 54171 GGAGCTTTACTTGGGGAAAATAAACTCCACTTTCCGTTATTTTTCACCCGCTTCATGAAT 54230 Query 69610 AGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTA 69669 | ||| || ||||| | || | || | ||||| | ||| ||| ||| || | Sbjct 54231 AAATCTGGGATCCACAAGGCAAAGAACAAGTCTCTCGCTCTCAATTCATCAGGGCCATGA 54290 Query 69670 ttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 69729 || ||| ||| || || | ||||| || || ||||| || || | || || || Sbjct 54291 TTCTTTCGAAGTTCAAGCACTTCCATGATGTCCCCGTGCCAAGGCTCGATGTAAATAGCA 54350 Query 69730 ATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACT 69789 | | ||||||||||| |||||||||||||| | ||||| ||||||||||| ||||| Sbjct 54351 AATGCGCCCGGTCGTTTGTTTCCTCCCTGATCGACATATCTTGCAGTGTTATTGAAGACT 54410 Query 69790 CTCAGCATCGGAA-TAATACCATTAGATTTACCATT 69824 ||| ||| |||| |||| || || || | ||||| Sbjct 54411 TTCAACATTGGAACTAAT-CCGTTTGAGGTGCCATT 54445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908344922920