Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq10 154 1e-32 >seq10 Length=432243 Score = 154 bits (170), Expect = 1e-32 Identities = 566/874 (65%), Gaps = 37/874 (4%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| |||| || || | || | || || ||||||||||||||||| || | || Sbjct 413219 TTTGTGTTGTTCCCTATCAAGTACAACGAGATTTGGCAAATGTACAAAAAGGCCGAAGCA 413160 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG-CATT 43818 || || ||||| || |||||| |||| ||| | |||||| | | |||| || Sbjct 413159 TCTTTCTGGACTGCGGAAGAAATTGACTTGTCGAAAGACATCAACGACTGGAAGAACAGA 413100 Query 43819 AAAACC-ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGAC 43876 | || |||| || | | || || || || ||||| || |||||||| ||| Sbjct 413099 ATGACTGACAACGAGAGATTCTTCATCTCCAGAGTGTTGGCTTTCTTTGCTGCTTCGGAC 413040 Query 43877 GGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGC 43935 || || |||||||| || ||||| || ||| || || || || | ||||| || Sbjct 413039 GGAATTGTCAATGAGAACTTGGTGGAGAACTTTTCTGCT-GAGGTCCAGATCCCAGAGGC 412981 Query 43936 ACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCT 43995 |||||| || || || || || || ||||| || || ||||||| ||| | | Sbjct 412980 CAAATGTTTCTACGGATTCCAGATCATGATGGAAAACATCCACTCGGAAACCTACTCTTT 412921 Query 43996 TCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGA 44055 |||| || | ||||||||||| | ||| | ||||| || || || || Sbjct 412920 GTTGATCGACTCCTACATCAAAGACCCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGA 412861 Query 44056 AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA-ATTCAA--A 44112 || | ||| ||||| | || || || |||||| | | |||||| | | | | Sbjct 412860 AAACATCCCTTGCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGACGACGA 412801 Query 44113 TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGG 44172 | | |||| ||| || | || || ||||| | ||| ||||| |||||||| || || Sbjct 412800 GGCCTTGTTTGCCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGG 412741 Query 44173 ATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTC 44232 |||||||| | || || ||||| ||||| |||||||||||||||| | ||||| || Sbjct 412740 CTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTC 412681 Query 44233 AAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT------ 44286 || || || || | | || ||||| || || || ||||| |||||||| Sbjct 412680 CAACGAATTGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCCTGCTTGTTGTTCTC 412621 Query 44287 --ACTTGGATATCTAGGAGACGATA---AGCCTTCATGTAAGACAATTACAGATATTGTT 44341 ||||| | | | |||| | | ||| || || ||| | ||| || Sbjct 412620 TCACTTGAACAAC----AGACCAAACCCAGCTATCGTG-GAGA---------AGATTATT 412575 Query 44342 GTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATA 44401 ||||| || | || ||| |||||| | || || || || | || || | Sbjct 412574 ACTGAGGCCGTCACTATTGAAAAAGAATACTTTACCGATGCCTTGCCAGCAAGCTTGTTG 412515 Query 44402 GGAATGAA-TG-AACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTT 44459 |||||||| || || |||||| |||||| | || | | |||| ||| | || ||| Sbjct 412514 GGAATGAACTGTGAC--TTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTG 412457 Query 44460 TGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATA 44519 ||| ||||| | | || || | ||| ||||| || || |||||||| || | Sbjct 412456 TGGCCTTGGGTAACAAGAAGGTTTACAATGTCACCAACCCATTCGACTTTATGGAGAACA 412397 Query 44520 TTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553 |||| |||| ||| || || |||||||| || || Sbjct 412396 TTTCCTTGGCAGGAAAGACCAACTTTTTCGAGAA 412363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455743268265