Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq10 154 1e-32
>seq10
Length=432243
Score = 154 bits (170), Expect = 1e-32
Identities = 566/874 (65%), Gaps = 37/874 (4%)
Strand=Plus/Minus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
||||| |||| || || | || | || || ||||||||||||||||| || | ||
Sbjct 413219 TTTGTGTTGTTCCCTATCAAGTACAACGAGATTTGGCAAATGTACAAAAAGGCCGAAGCA 413160
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG-CATT 43818
|| || ||||| || |||||| |||| ||| | |||||| | | |||| ||
Sbjct 413159 TCTTTCTGGACTGCGGAAGAAATTGACTTGTCGAAAGACATCAACGACTGGAAGAACAGA 413100
Query 43819 AAAACC-ACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGAC 43876
| || |||| || | | || || || || ||||| || |||||||| |||
Sbjct 413099 ATGACTGACAACGAGAGATTCTTCATCTCCAGAGTGTTGGCTTTCTTTGCTGCTTCGGAC 413040
Query 43877 GGGATAGTCAATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGC 43935
|| || |||||||| || ||||| || ||| || || || || | ||||| ||
Sbjct 413039 GGAATTGTCAATGAGAACTTGGTGGAGAACTTTTCTGCT-GAGGTCCAGATCCCAGAGGC 412981
Query 43936 ACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCT 43995
|||||| || || || || || || ||||| || || ||||||| ||| | |
Sbjct 412980 CAAATGTTTCTACGGATTCCAGATCATGATGGAAAACATCCACTCGGAAACCTACTCTTT 412921
Query 43996 TCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGA 44055
|||| || | ||||||||||| | ||| | ||||| || || || ||
Sbjct 412920 GTTGATCGACTCCTACATCAAAGACCCTAAAGAGGCTGACTTTTTGTTCAACGCTATCGA 412861
Query 44056 AACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA-ATTCAA--A 44112
|| | ||| ||||| | || || || |||||| | | |||||| | | | |
Sbjct 412860 AAACATCCCTTGCATTAAGAAGAAGGCCGAGTGGGCCTTGAGATGGATCGCAGACGACGA 412801
Query 44113 TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGG 44172
| | |||| ||| || | || || ||||| | ||| ||||| |||||||| || ||
Sbjct 412800 GGCCTTGTTTGCCGAAAGATTGGTGGCCTTTGCTGCTGTCGAAGGTATTTTCTTCTCTGG 412741
Query 44173 ATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTC 44232
|||||||| | || || ||||| ||||| |||||||||||||||| | ||||| ||
Sbjct 412740 CTCGTTTGCCTCTATCTTCTGGTTGAAGAAGAGAGGTTTGATGCCTGGTCTTACGTTCTC 412681
Query 44233 AAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT------ 44286
|| || || || | | || ||||| || || || ||||| ||||||||
Sbjct 412680 CAACGAATTGATTTGCAGAGACGAAGGTTTGCACACTGACTTTGCCTGCTTGTTGTTCTC 412621
Query 44287 --ACTTGGATATCTAGGAGACGATA---AGCCTTCATGTAAGACAATTACAGATATTGTT 44341
||||| | | | |||| | | ||| || || ||| | ||| ||
Sbjct 412620 TCACTTGAACAAC----AGACCAAACCCAGCTATCGTG-GAGA---------AGATTATT 412575
Query 44342 GTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATA 44401
||||| || | || ||| |||||| | || || || || | || || |
Sbjct 412574 ACTGAGGCCGTCACTATTGAAAAAGAATACTTTACCGATGCCTTGCCAGCAAGCTTGTTG 412515
Query 44402 GGAATGAA-TG-AACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTT 44459
|||||||| || || |||||| |||||| | || | | |||| ||| | || |||
Sbjct 412514 GGAATGAACTGTGAC--TTGATGTGCCAATACGTCGAGTTCGTTGCCGATAGATTGCTTG 412457
Query 44460 TGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATA 44519
||| ||||| | | || || | ||| ||||| || || |||||||| || |
Sbjct 412456 TGGCCTTGGGTAACAAGAAGGTTTACAATGTCACCAACCCATTCGACTTTATGGAGAACA 412397
Query 44520 TTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553
|||| |||| ||| || || |||||||| || ||
Sbjct 412396 TTTCCTTGGCAGGAAAGACCAACTTTTTCGAGAA 412363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455743268265
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |