Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq13 107 2e-18 seq14 98.7 8e-16 >seq13 Length=360411 Score = 107 bits (118), Expect = 2e-18 Identities = 294/444 (66%), Gaps = 11/444 (2%) Strand=Plus/Minus Query 131549 TCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCC--AAACGAACTGTCCAAATTGGGAC 131606 || || ||||||||||| | |||||| | | ||| | || | | | ||||| ||| Sbjct 45478 TCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGTAGAC-ATCAG-CCAAACCAGGAG 45421 Query 131607 ATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAAT 131666 ||| | ||| | | | | ||| | ||||| |||||||||| |||||| ||||||| Sbjct 45420 CTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAAT 45361 Query 131667 CCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttt 131726 |||| | ||| | || |||| |||||| ||| | | ||||| |||| || Sbjct 45360 CCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACC--GTGGTT 45303 Query 131727 ttttCAAATTT--AAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCAT 131784 |||| ||| | | ||||| |||||||| |||||||| || ||||| || | || | Sbjct 45302 CTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAA 45243 Query 131785 TGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCG 131841 |||||| | | || || ||||| | |||| ||| | |||||||| | || || Sbjct 45242 AGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACG 45183 Query 131842 CAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGC 131901 || ||| || | |||||| | | || || || | |||||| |||| | Sbjct 45182 CACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACT 45123 Query 131902 TCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTT 131961 |||||| ||||| | || | |||||||| || | || || |||| |||||| | Sbjct 45122 TCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGT 45063 Query 131962 GGTTAGAGTGTTATAGATACCTTC 131985 ||| |||| || ||||| || Sbjct 45062 CTTTAATGTGTCGTAAATACCGTC 45039 >seq14 Length=288459 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| ||||| || || || || || ||||| || ||||||||| | Sbjct 84847 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84906 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||||| | || ||||| || |||| | | || || || || || Sbjct 84907 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGA 84966 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||||| || | | | || | |||||| | | ||||||| Sbjct 84967 ATTCCCTCCTTATCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACT 85026 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||||| |||| ||||| |||||||||||||| Sbjct 85027 TCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| ||||| || || || || || ||||| || ||||||||| | Sbjct 84163 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84222 Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| | || ||||| ||| | || | | || || || || || Sbjct 84223 AAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 84281 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| || | | || | |||||| | | |||||| Sbjct 84282 AATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAAC 84341 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||| || | || || |||| ||| || || |||||||||||| Sbjct 84342 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATA 84390 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 || || || | ||| | ||| ||||| || || || || || || ||||| ||||||||| Sbjct 83932 TTTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCG 83991 Query 27078 CTCAT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136 || ||| || | ||||| | || ||||| ||| | || | | || || || || Sbjct 83992 GACAAAGTTCTGC-CATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGG 84050 Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196 || | ||||| || || ||||||| || | | || | |||||| | | ||| Sbjct 84051 TGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTC 84110 Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| ||| || | || || |||| ||| || || |||||||||||| Sbjct 84111 AACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATA 84162 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| | ||| ||||| || || ||||| || || ||||| |||||||| | Sbjct 84619 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGAC 84678 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||||| | || ||||| ||| | || | | || || || || || Sbjct 84679 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 84738 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | || | ||||| | | ||||||| Sbjct 84739 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACT 84798 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| ||| || | || || |||| ||| || || || ||||||||| Sbjct 84799 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCATA 84846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934125518936