Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq13 107 2e-18
seq14 98.7 8e-16
>seq13
Length=360411
Score = 107 bits (118), Expect = 2e-18
Identities = 294/444 (66%), Gaps = 11/444 (2%)
Strand=Plus/Minus
Query 131549 TCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCC--AAACGAACTGTCCAAATTGGGAC 131606
|| || ||||||||||| | |||||| | | ||| | || | | | ||||| |||
Sbjct 45478 TCATACTTTTCGTACAAAGCTTCAAACTCATCGCCGTAGAC-ATCAG-CCAAACCAGGAG 45421
Query 131607 ATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAAT 131666
||| | ||| | | | | ||| | ||||| |||||||||| |||||| |||||||
Sbjct 45420 CTTCATTTGGAGAAAACAAAGTCCAGTCACCGTTTTGTTCAACTCTCTTCATGAACAAAT 45361
Query 131667 CCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttt 131726
|||| | ||| | || |||| |||||| ||| | | ||||| |||| ||
Sbjct 45360 CCGGGATCCAAAGAGCAGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACC--GTGGTT 45303
Query 131727 ttttCAAATTT--AAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCAT 131784
|||| ||| | | ||||| |||||||| |||||||| || ||||| || | || |
Sbjct 45302 CTTTCTAATGTCGATGAAGTCGAAAATGTCAGCATGCCAAGGCTCCAAGTAAATCGCAAA 45243
Query 131785 TGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCG 131841
|||||| | | || || ||||| | |||| ||| | |||||||| | || ||
Sbjct 45242 AGCGCCTGGCCTCTTGTTGCCACCTTGGTCGACATAACGTGCTGTGTTGTTGAAAACACG 45183
Query 131842 CAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGC 131901
|| ||| || | |||||| | | || || || | |||||| |||| |
Sbjct 45182 CACCATTGGAATGATACCGTTAGAAGTACCGTTAGTACCTGCAATGTAAGCGCCAGTACT 45123
Query 131902 TCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTT 131961
|||||| ||||| | || | |||||||| || | || || |||| |||||| |
Sbjct 45122 TCTGATGTTGTGGATGTGCAAACCAATACCACCAGCACTCTTGGAAATTAAAGCGCATGT 45063
Query 131962 GGTTAGAGTGTTATAGATACCTTC 131985
||| |||| || ||||| ||
Sbjct 45062 CTTTAATGTGTCGTAAATACCGTC 45039
>seq14
Length=288459
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||| || || || || || ||||| || ||||||||| |
Sbjct 84847 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84906
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | ||||||| | || ||||| || |||| | | || || || || ||
Sbjct 84907 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGGTCAGGAGGA 84966
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| ||||| ||||||| || | | | || | |||||| | | |||||||
Sbjct 84967 ATTCCCTCCTTATCTTGGATCTTGGACTTAACGTTGTCGATAGTGTCGGAAGATTCAACT 85026
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| | || || | ||||| |||| ||||| ||||||||||||||
Sbjct 85027 TCCAATGTGATGGTCTTGCCGGTCAAGGTTTTAACAAAGATTTGCAT 85073
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||| || || || || || ||||| || ||||||||| |
Sbjct 84163 CCACCTCTCAATCTCAACACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 84222
Query 27081 AT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| ||| || ||||||| | || ||||| ||| | || | | || || || || ||
Sbjct 84223 AAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 84281
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||| || || ||||||| || | | || | |||||| | | ||||||
Sbjct 84282 AATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTCAAC 84341
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||||| ||| || | || || |||| ||| || || ||||||||||||
Sbjct 84342 TTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATA 84390
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077
|| || || | ||| | ||| ||||| || || || || || || ||||| |||||||||
Sbjct 83932 TTTCCACCTCTCAATCTCAACACCAAGTGCAAAGTGGATTCCTTCTGAATGTTGTAGTCG 83991
Query 27078 CTCAT-GTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136
|| ||| || | ||||| | || ||||| ||| | || | | || || || ||
Sbjct 83992 GACAAAGTTCTGC-CATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGG 84050
Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196
|| | ||||| || || ||||||| || | | || | |||||| | | |||
Sbjct 84051 TGGAATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCGATAGTGTCGGACGATTC 84110
Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||||||| ||| || | || || |||| ||| || || ||||||||||||
Sbjct 84111 AACTTCTAAAGTGATGGTCTTACCGGTCAAAGTCTTAACGAAGATTTGCATA 84162
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||| || || ||||| || || ||||| |||||||| |
Sbjct 84619 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTAGATTCCTTCTGAATGTTGTAGTCAGAC 84678
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | ||||||| | || ||||| ||| | || | | || || || || ||
Sbjct 84679 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 84738
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || ||||||| || | | || | ||||| | | |||||||
Sbjct 84739 ATTCCCTCCTTGTCTTGGATCTTGGACTTAACATTGTCAATTGTGTCGGAAGATTCAACT 84798
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| ||| || | || || |||| ||| || || || |||||||||
Sbjct 84799 TCTAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAAATTTGCATA 84846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934125518936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |