Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq13 345 5e-90 seq12 82.4 1e-10 >seq13 Length=360411 Score = 345 bits (382), Expect = 5e-90 Identities = 1139/1747 (65%), Gaps = 43/1747 (2%) Strand=Plus/Minus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428 |||||||| || ||||| | ||| | |||||| |||| | ||||| |||| | ||| Sbjct 46576 TAGTACATACCCGTCTTCAATCCCTTCTTCCATCCGTAAAAGTGCATGGAAGTCAACTTA 46517 Query 110429 GACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAA-GCGC 110485 ||| || || | ||| || ||||| ||| ||||| | ||||| || || Sbjct 46516 CCCATAGTAGGTTCTCTGATGTGGATGTTCAACGACTGTGACT--GATCAATAAACGCAG 46459 Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545 | | || | || ||||| ||||||| || |||| |||||||| || || ||| Sbjct 46458 CTCTGTCG-GCAGCCATGTCAATGATATGCTTCTGAGAGATTTCCCACACGGTTTTATAT 46400 Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605 | | |||||| || ||||||| || || | | ||| ||||| || || | Sbjct 46399 AAACGCTTGATTTCGTCTGGGACATTTGGTAAAGACTGAATGGATCCGTTG---TTGGCA 46343 Query 110606 ATGAGATC---CTTCATATCCTTGGACCAGAGACCAA--TCTTCTTGAGGTCATTGACGA 110660 |||| | |||||||| | ||| | ||| | || || | ||| || | | Sbjct 46342 ATGATGTTGTTCTTCATATTGTCATTCCAAATACCTAAGTCAACT--AAGTCCTTCAACA 46285 Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720 ||| ||| ||||| ||||| || || || |||||| ||| ||||| | || Sbjct 46284 TGTGTGGGTTAACAATCTGGAACTCGCCGGCAAGCACTCTTCTGGAGTAAATGTTGGATG 46225 Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTG 110780 |||| |||||||||||||| || |||||||||||||| | || |||||||||||||| | Sbjct 46224 TGTAAGGTTCAAAGCATTCGTTGTTACCCAAGATTTGAGAAGTAGAGGCTGTTGGCATCG 46165 Query 110781 GTGCCATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATC 110838 | || | | ||||| | | | ||||| | | | || ||| | | ||| Sbjct 46164 GAGCAACAAGCAAAGAATTT--CTGAGACCGTGTTTGGCCAAATTTTGCTTCAAAGTATC 46107 Query 110839 CCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGG 110896 |||||| | | | | | |||| ||||||| ||| |||| | || || | Sbjct 46106 CCAGTCCCACAACTCGGATGGCTTTCTG--TCCCACAAGTCGTACTGCAACAATCCCTTT 46049 Query 110897 GACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCT 110955 ||||| |||||||| ||| | || ||||| | ||||| | | ||| | || | || | Sbjct 46048 GACGCAGGAGAACCTTCATATGTCTCATATGGACCTTCCTCCTGAGCAAGCTCGATAGAT 45989 Query 110956 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 111015 || |||| | || ||||| ||||| || || || || |||| ||| || ||||| Sbjct 45988 -GCTTCCACAGCAGCATGATAAATGGTCTCGAATATCTGAATGTTCAACTCTTTAGCTTC 45930 Query 111016 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075 | || || || | | | | | || ||| |||| || ||||||||||| || | Sbjct 45929 CTGGGAGTCGAAAGGCAATCTCAAGGACATGAATGCATCAGCAAGACCTTGAACTCCAAG 45870 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 111135 | |||||||||||| || |||||| || ||| || |||||| || ||||||||||| Sbjct 45869 AGCAATAGGTCTGTTTCTCATATTGGATCTTCTGGCTTCCTCAACAGGGTAAAAATTTCT 45810 Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA-- 111193 |||||||| || ||| | ||| | ||||||| ||| || | || || | || ||| Sbjct 45809 GTCAATGATTCTGTTCAAGTTTCTAGTAACAACCTTGGTCACCTCGTGCAACTTATCAAA 45750 Query 111194 -TAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGATGCCA 111248 | | | | | || | || || || || ||||| || || || |||| Sbjct 45749 GTTGTACCAGGAACTAGATGCATCTTTCTCA-ACGAATGAAGGCAAAGCAATGGAGGCCA 45691 Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308 | || || ||||| || || | |||||| | ||| || ||| ||||| | Sbjct 45690 AGTTACAGACAGCAACTTCTTCTGGGGAAGAGTACTCGACAATCTCACAACACAAGTTAG 45631 Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 | || || | ||||| |||||||||||| | |||||||| || ||||||||||| | Sbjct 45630 ATGATTTGATAATACCCAAGTTCTTTTGGTTAGTTTTCTTGTTACAAGCATCCTTGTACA 45571 Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCG 111427 |||| | || || || ||||| || || | || | |||| | ||||| | | | | Sbjct 45570 ACATGAATGGAGTTCCTGTCTCAGTTTGCGCTTCCAAGATAGAGTACCAAAGCTTTTGAG 45511 Query 111428 GCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 111487 || | || ||| | | || || || ||| |||||| ||| | ||||||||| Sbjct 45510 CCTTG-ACGGTGGATCTTCCACGGCCTTCTCTCTCATACTTTTCGTACAAAGCTTCAAAC 45452 Query 111488 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 111547 || || || | || | | ||| || || | | |||| | || | || ||| | | Sbjct 45451 TCATCGCCGTAGACATCAGCCAAACCAGGAGCTTCATTTGGAGAAAACAAAGTCCAGTCA 45392 Query 111548 CCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 || || ||||| | ||||||||| | || || ||||| || | | || | |||| Sbjct 45391 CCGTTTTGTTCAACTCTCTTCATGAACAAATCCGGGATCCAAAGAGCAGGGAACAAATCT 45332 Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 || | | ||||| | ||| ||||| || | || | ||| || | || || Sbjct 45331 CTGGCTCTAATTTCTTCCTTACCGTGGTTCTTTCTAATGTCGATGAAGTCGAAAATGTCA 45272 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATC----CCTTTCGACGCCCAGCTTGATT 111723 || ||||| ||||| | || | || | || | ||| | | | ||| |||| | Sbjct 45271 GCATGCCAAGGCTCCAAGTAAATCGCAAAAGCGCCTGGCCTCTTGTTG-CCACCTTGGTC 45213 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 ||||| || |||||| ||| || || || | ||||||||| ||||| | || ||| Sbjct 45212 GACATAACGTGCTGTGTTGTTGAAAACACGCACCATTGGAATGATACCGTTAGAAGTACC 45153 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || ||| || | | ||| | | |||||||||| |||||||| Sbjct 45152 GTTAGTACCTGCAATGTAAGCGCCAGTACTTCTGATGTTGTGGATGTGCAAACCAATACC 45093 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 ||||| | ||| || ||| || || | | | || | || ||||||| ||| || Sbjct 45092 ACCAGCACTCTTGGAAATTAAAGCGCATGTCTTTAATGTGTCGTAAATACCGTCGATGGA 45033 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963 ||| ||||| |||| | |||||| ||| ||||| || || ||||| ||||| ||||| Sbjct 45032 GTCATCCTTCATGGCAACAAGGAAACAAGACGACATTTGGGGGCTTGGGGTACCTGCATT 44973 Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 112022 ||| | |||||| | ||||| | || || || ||||||||| | ||| || || | Sbjct 44972 GAACAAGGTTGGAGAACCGTGAGT-AAAGTATCTCTGGGACATCAAATTGTAAGTTTCGA 44914 Query 112023 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTG 112082 ||| |||||||| | |||||| || || | || || | ||||| || | ||||| Sbjct 44913 TCACACGTTCAATGTCATTCCCGTGAATACCAACCGCAACTCTCATGATCAAATGCTGTG 44854 Query 112083 GGGTTTC 112089 | |||| Sbjct 44853 GTCTTTC 44847 >seq12 Length=420913 Score = 82.4 bits (90), Expect = 1e-10 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 164581 CCATTCTCATGCCAAATGGTGTGTATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGA 164640 ||||| || | |||| ||| || || | || |||||| |||| |||||||| || | Sbjct 286591 CCATTATCGTTCCAATTGGAACCTACGGAAGAGTAGCACCAAGATCGGGTCTCGCAGTCA 286650 Query 164641 AGCATGGTATTCAAGTTGGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAG 164700 | || || ||| | ||||| |||||||||||| | ||||| | || || || || Sbjct 286651 AACACGGAATTTCAACAGGTGCCGGTGTTATTGATGCAGACTACAGGGGCGAGGTGAAGA 286710 Query 164701 TCGTTCTCTTCAATCACGGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCAC 164760 | ||||| ||||| || | | || ||||||||| | || | || || | || |||| Sbjct 286711 TTGTTCTTTTCAACCATTCAAAGAAGGACTTTGAGATCAAAACTGGAGACAGAATTGCAC 286770 Query 164761 AACTTGTCCTTGAGC 164775 || | || | |||| Sbjct 286771 AATTGGTGTTGGAGC 286785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031583928800